FFCP PHASE1:Hg19::chr12:53288445..53288448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53288445..53288448,- | |||
|description=CAGE_peak_at_chr12:53288445..53288448,- | |description=CAGE_peak_at_chr12:53288445..53288448,- | ||
|id=chr12:53288445..53288448,- | |id=chr12:53288445..53288448,- | ||
|ontology_enrichment_celltype=CL:0000066!2.75e-28!254;CL:0000083!5.65e-10!4;CL:0000223!2.42e-09!59;CL:0000039!2.93e-08!7;CL:0000586!2.93e-08!7;CL:0002251!1.96e-07!21;CL:0002076!3.48e-07!43;CL:0002178!4.58e-07!3;CL:0000076!7.93e-07!62;CL:0002150!8.57e-07!3;CL:0000861!8.57e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.75e-28!254;CL:0000083!5.65e-10!4;CL:0000223!2.42e-09!59;CL:0000039!2.93e-08!7;CL:0000586!2.93e-08!7;CL:0002251!1.96e-07!21;CL:0002076!3.48e-07!43;CL:0002178!4.58e-07!3;CL:0000076!7.93e-07!62;CL:0002150!8.57e-07!3;CL:0000861!8.57e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.07e-13;2!CL:1000415;1.07e-13;2!CL:0000174;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.30e-14,2;CL:0002097,8.28e-14,2;CL:0000174,1.19e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.07e-13;2!UBERON:0010056;1.07e-13;2!UBERON:0009497;1.36e-08;13 | |||
|ontology_enrichment_disease=DOID:305!7.81e-77!106;DOID:0050687!5.60e-65!143;DOID:162!7.70e-39!235;DOID:14566!1.22e-37!239;DOID:1749!5.78e-23!14;DOID:299!8.28e-20!25;DOID:170!4.37e-14!6;DOID:7!9.08e-12!39;DOID:1793!5.65e-10!4;DOID:0050686!6.47e-09!137;DOID:3119!2.36e-07!14;DOID:193!7.80e-07!29 | |ontology_enrichment_disease=DOID:305!7.81e-77!106;DOID:0050687!5.60e-65!143;DOID:162!7.70e-39!235;DOID:14566!1.22e-37!239;DOID:1749!5.78e-23!14;DOID:299!8.28e-20!25;DOID:170!4.37e-14!6;DOID:7!9.08e-12!39;DOID:1793!5.65e-10!4;DOID:0050686!6.47e-09!137;DOID:3119!2.36e-07!14;DOID:193!7.80e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.82e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.89e-11,106;DOID:0050687,1.78e-08,143;DOID:1749,5.36e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.10e-12!7;UBERON:0001173!2.10e-12!7;UBERON:0004912!2.10e-12!7;UBERON:0003343!2.16e-10!4;UBERON:0004785!2.16e-10!4;UBERON:0001007!1.05e-09!155;UBERON:0001555!1.05e-09!155;UBERON:0007026!1.05e-09!155;UBERON:0004119!1.63e-09!169;UBERON:0000925!1.63e-09!169;UBERON:0006595!1.63e-09!169;UBERON:0000344!2.65e-09!12;UBERON:0003729!2.74e-08!5;UBERON:0000077!3.96e-08!130;UBERON:0005911!6.48e-08!82;UBERON:0002110!8.48e-08!3;UBERON:0006242!8.48e-08!3;UBERON:0002323!1.39e-07!46;UBERON:0002075!3.46e-07!18;UBERON:0005156!5.14e-07!59;UBERON:0000990!5.14e-07!59;UBERON:0004458!6.56e-07!49;UBERON:0005409!7.69e-07!35 | |ontology_enrichment_uberon=UBERON:0002294!2.10e-12!7;UBERON:0001173!2.10e-12!7;UBERON:0004912!2.10e-12!7;UBERON:0003343!2.16e-10!4;UBERON:0004785!2.16e-10!4;UBERON:0001007!1.05e-09!155;UBERON:0001555!1.05e-09!155;UBERON:0007026!1.05e-09!155;UBERON:0004119!1.63e-09!169;UBERON:0000925!1.63e-09!169;UBERON:0006595!1.63e-09!169;UBERON:0000344!2.65e-09!12;UBERON:0003729!2.74e-08!5;UBERON:0000077!3.96e-08!130;UBERON:0005911!6.48e-08!82;UBERON:0002110!8.48e-08!3;UBERON:0006242!8.48e-08!3;UBERON:0002323!1.39e-07!46;UBERON:0002075!3.46e-07!18;UBERON:0005156!5.14e-07!59;UBERON:0000990!5.14e-07!59;UBERON:0004458!6.56e-07!49;UBERON:0005409!7.69e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;4.07e-15;7!UBERON:0001173;4.07e-15;7!UBERON:0002423;1.35e-09;25!UBERON:0002369;1.41e-09;3!UBERON:0002110;1.41e-09;3!UBERON:0001723;1.41e-09;3!UBERON:0001235;1.41e-09;3!UBERON:0006858;1.41e-09;3!UBERON:0001033;1.41e-09;3!UBERON:0001052;1.31e-07;4!UBERON:0003343;1.69e-07;4!UBERON:0002394;1.69e-07;4!UBERON:0004785;1.69e-07;4!UBERON:0003928;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,4.42e-12,9;UBERON:0001173,4.42e-12,9;UBERON:0004912,4.42e-12,9;UBERON:0002110,1.10e-09,3;UBERON:0006242,1.10e-09,3;UBERON:0002369,1.19e-09,3;UBERON:0001235,1.19e-09,3;UBERON:0006858,1.19e-09,3;UBERON:0009497,1.28e-09,25;UBERON:0000015,1.28e-09,25;UBERON:0002423,1.28e-09,25;UBERON:0006235,1.28e-09,25;UBERON:0004161,1.28e-09,25;UBERON:0001723,1.41e-09,3;UBERON:0001033,1.41e-09,3;UBERON:0010056,1.41e-09,3;UBERON:0001052,1.31e-07,4;UBERON:0003343,1.69e-07,4;UBERON:0004785,1.69e-07,4 | |||
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| ||
|short_description=p@chr12:53288445..53288448,- | |short_description=p@chr12:53288445..53288448,- | ||
}} | }} |
Latest revision as of 09:42, 24 July 2015
Short description: | p@chr12:53288445..53288448, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53288445..53288448, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.30e-14 | 2 |
cortical cell of adrenal gland | 8.28e-14 | 2 |
steroid hormone secreting cell | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 4.42e-12 | 9 |
biliary tree | 4.42e-12 | 9 |
biliary bud | 4.42e-12 | 9 |
gallbladder | 1.10e-09 | 3 |
gall bladder primordium | 1.10e-09 | 3 |
adrenal gland | 1.19e-09 | 3 |
adrenal cortex | 1.19e-09 | 3 |
adrenal/interrenal gland | 1.19e-09 | 3 |
epithelium of foregut-midgut junction | 1.28e-09 | 25 |
anatomical boundary | 1.28e-09 | 25 |
hepatobiliary system | 1.28e-09 | 25 |
foregut-midgut junction | 1.28e-09 | 25 |
septum transversum | 1.28e-09 | 25 |
tongue | 1.41e-09 | 3 |
gustatory system | 1.41e-09 | 3 |
future tongue | 1.41e-09 | 3 |
rectum | 1.31e-07 | 4 |
mucosa of oral region | 1.69e-07 | 4 |
respiratory system mucosa | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.89e-11 | 106 |
cell type cancer | 1.78e-08 | 143 |
squamous cell carcinoma | 5.36e-08 | 14 |