FFCP PHASE1:Hg19::chr12:53517074..53517079,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:53517074..53517079,- | |||
|description=CAGE_peak_at_chr12:53517074..53517079,- | |||
|id=chr12:53517074..53517079,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;3.18e-25;3!CL:1000428;3.18e-25;3!CL:0000039;9.77e-24;7!CL:0000586;9.77e-24;7!CL:0002559;1.45e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.99e-25,3;CL:1000428,2.99e-25,3;CL:0000039,1.06e-23,7;CL:0000586,1.06e-23,7;CL:0002559,1.40e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.69e-17;10!UBERON:0005564;7.69e-17;10!UBERON:0004872;1.73e-11;7!UBERON:0006241;2.55e-07;3!UBERON:0003057;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;5.39e-08;22!DOID:2994;5.39e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.52e-08,22;DOID:2994,5.52e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!8.60e-09!11;UBERON:0003101!1.27e-07!22;UBERON:0000079!1.27e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.94e-25;3!UBERON:0000412;3.18e-25;3!UBERON:0001992;3.18e-25;3!UBERON:0000473;7.24e-21;8!UBERON:0005795;4.28e-19;1!UBERON:0004177;1.08e-15;5!UBERON:0005057;1.08e-15;5!UBERON:0002073;1.45e-15;5!UBERON:0003135;2.25e-15;11!UBERON:0002067;4.52e-09;9!UBERON:0002323;4.96e-09;45!UBERON:0000991;2.38e-08;21!UBERON:0003101;5.39e-08;22!UBERON:0000079;5.39e-08;22!UBERON:0000922;6.55e-08;49!UBERON:0002240;2.55e-07;3!UBERON:0005174;2.55e-07;3!UBERON:0001137;2.55e-07;3!UBERON:0002553;8.44e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.07e-25,3;UBERON:0004854,2.07e-25,3;UBERON:0009034,2.07e-25,3;UBERON:0002095,2.07e-25,3;UBERON:0004782,2.07e-25,3;UBERON:0003281,2.07e-25,3;UBERON:0009664,2.07e-25,3;UBERON:0002296,2.07e-25,3;UBERON:0005602,2.07e-25,3;UBERON:0001179,2.07e-25,3;UBERON:0006293,2.07e-25,3;UBERON:0000412,2.99e-25,3;UBERON:0001992,2.99e-25,3;UBERON:0000473,7.75e-21,8;UBERON:0002073,1.40e-15,5;UBERON:0005086,1.40e-15,5;UBERON:0003135,2.37e-15,11;UBERON:0004177,1.77e-11,7;UBERON:0005057,1.77e-11,7;UBERON:0000945,3.68e-10,8;UBERON:0010039,3.68e-10,8;UBERON:0002323,6.04e-10,46;UBERON:0004458,2.44e-09,49;UBERON:0002067,4.43e-09,9;UBERON:0004016,4.43e-09,9;UBERON:0010083,4.43e-09,9;UBERON:0003886,1.78e-08,54;UBERON:0000991,2.45e-08,21;UBERON:0009196,2.45e-08,21;UBERON:0009117,2.45e-08,21;UBERON:0005564,2.45e-08,21;UBERON:0004176,5.52e-08,22;UBERON:0003101,5.52e-08,22;UBERON:0000079,5.52e-08,22;UBERON:0002553,1.66e-07,61;UBERON:0002240,2.47e-07,3;UBERON:0005174,2.47e-07,3;UBERON:0001137,2.47e-07,3;UBERON:0004457,4.57e-07,12;UBERON:0000042,4.57e-07,12;UBERON:0003887,4.57e-07,12;UBERON:0004923,5.93e-07,66 | |||
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|short_description=p@chr12:53517074..53517079,- | |||
}} |
Latest revision as of 09:46, 24 July 2015
Short description: | p@chr12:53517074..53517079, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53517074..53517079, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.99e-25 | 3 |
stem cell of epidermis | 2.99e-25 | 3 |
germ line cell | 1.06e-23 | 7 |
germ cell | 1.06e-23 | 7 |
hair follicle cell | 1.40e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.52e-08 | 22 |
germ cell cancer | 5.52e-08 | 22 |