FFCP PHASE1:Hg19::chr12:58142997..58143015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:58142997..58143015,- | |||
|coexpression_cluster_id=C181 | |coexpression_cluster_id=C181 | ||
|description=CAGE_peak_at_chr12:58142997..58143015,- | |description=CAGE_peak_at_chr12:58142997..58143015,- | ||
Latest revision as of 10:57, 24 July 2015
| Short description: | p@chr12:58142997..58143015, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr12:58142997..58143015, - |
| Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr12:58142997..58143015- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| perirenal preadipocyte | 5.93e-26 | 1 |
| glomerular endothelial cell | 1.21e-20 | 5 |
| glomerular cell | 4.69e-15 | 7 |
| kidney corpuscule cell | 4.69e-15 | 7 |
| kidney cortical cell | 3.41e-09 | 12 |
| renal cortical epithelial cell | 3.41e-09 | 12 |
| epithelial cell of nephron | 1.54e-07 | 15 |
| kidney cell | 9.37e-07 | 17 |
| kidney epithelial cell | 9.37e-07 | 17 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| primitive nephron | 4.69e-15 | 7 |
| renal glomerulus | 4.69e-15 | 7 |
| renal corpuscle | 4.69e-15 | 7 |
| glomerular capsule | 4.69e-15 | 7 |
| metanephric mesenchyme | 4.69e-15 | 7 |
| glomerular tuft | 4.69e-15 | 7 |
| S-shaped body | 4.69e-15 | 7 |
| renal vesicle | 4.69e-15 | 7 |
| comma-shaped body | 4.69e-15 | 7 |
| pituitary gland | 7.30e-14 | 2 |
Showing 1 to 10 of 39 entries
