FFCP PHASE1:Hg19::chr12:69921143..69921147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:69921143..69921147,+ | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_at_chr12:69921143..69921147,+ | |description=CAGE_peak_at_chr12:69921143..69921147,+ | ||
|id=chr12:69921143..69921147,+ | |id=chr12:69921143..69921147,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002174;1.63e-07;1!CL:0002591;1.63e-07;1!CL:0000501;1.63e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,1.48e-07,1;CL:0000501,1.48e-07,1;CL:0002591,2.17e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.39e-09;3!UBERON:0005425;6.57e-08;1!UBERON:0010227;1.63e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;4.56e-08;1!DOID:10165;4.56e-08;1!DOID:1798;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.57e-08,1;DOID:10165,4.57e-08,1;DOID:1798,4.57e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.73e-11!57;UBERON:0005068!1.73e-11!57;UBERON:0006241!1.73e-11!57;UBERON:0007135!1.73e-11!57;UBERON:0007023!3.41e-11!115;UBERON:0000073!5.77e-11!94;UBERON:0001016!5.77e-11!94;UBERON:0000955!3.28e-10!69;UBERON:0006238!3.28e-10!69;UBERON:0001017!7.07e-10!82;UBERON:0002616!1.10e-09!59;UBERON:0002780!1.29e-09!41;UBERON:0001890!1.29e-09!41;UBERON:0006240!1.29e-09!41;UBERON:0005743!3.74e-09!86;UBERON:0002346!3.83e-09!90;UBERON:0003080!4.46e-09!42;UBERON:0002020!2.67e-08!34;UBERON:0003528!2.67e-08!34;UBERON:0003075!5.21e-08!86;UBERON:0007284!5.21e-08!86;UBERON:0001893!1.27e-07!34;UBERON:0002791!1.43e-07!33;UBERON:0001869!6.18e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.57e-08;1!UBERON:0001785;6.57e-08;1!UBERON:0002464;6.57e-08;1!UBERON:0004904;6.57e-08;1!UBERON:0001021;6.57e-08;1!UBERON:0002079;1.63e-07;1!UBERON:0002038;1.63e-07;1!UBERON:0009661;1.63e-07;1!UBERON:0002950;1.63e-07;1!UBERON:0001891;1.63e-07;1!UBERON:0002784;4.20e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.96e-08,1;UBERON:0001785,5.96e-08,1;UBERON:0002464,5.96e-08,1;UBERON:0004904,5.96e-08,1;UBERON:0001021,5.96e-08,1;UBERON:0003902,5.96e-08,1;UBERON:0005425,5.96e-08,1;UBERON:0002079,1.22e-07,1;UBERON:0002038,3.17e-07,1;UBERON:0009661,3.17e-07,1;UBERON:0002950,3.17e-07,1;UBERON:0001891,3.17e-07,1;UBERON:0009616,3.17e-07,1;UBERON:0010286,3.17e-07,1;UBERON:0002784,4.34e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0.382067028739756,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.309868802321207,0.710846162437108,0.293600439334847,0,2.00544447470142,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0.545812300115692,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,0,1.25624332628372,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0,0.425208599930087,0.628975936525128,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.76171156811282,0.764546456250458,0,0,0,0,0.786021525498329,0.205601498999509,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0,0.579606171470105,0.14828656316206,0.267540828089713,0,0.339928028092699,0.766440987203842,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.802320587350522,1.15859523106239,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0.458426764241994,0,0,0.649094787309367,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.66944122552934,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0.352303495931295,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0,0.201504196455281,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,0.590789906681404,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0.61642896765115,0,0.224170287987055,0.985153801009636,0.862510299438069,0.641715181398742,0.254094624222463,0,0,0,1.27587750330633,0.749007023947182,2.99161459204025,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0.82707210449155,0.647142602455851,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0.368323955743585,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.721287081534056,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0.886860307073351,0,0,0,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0,0.284567373393656,0.159426272728822,0,0,1.05836791361941,0,0.280797178113459,0.228234679033192,0,2.50634477090067,0.338583555603207,0.1605880751037,0.403599414382095,0.851692475380653,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0.36408156524854,0.445773537109913,0.568272293612826,0,0,0.307160702099232,0.994147647766298,1.1253553312841,0.333926115068718,0.329607748453519,0.63337622438398,0.996239941255349,0.276283915531148,0.251932747854276,0.306806047506464,0.492339221844278,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.349839999984783,0,0.341380344856499,0,0.236387681767936,0,0.874813840149763,0.347249989866585,0,0.482385754501632,1.52581736317083,1.43753037910592,0.295547618953547,0.219385397153973,0,0.139423744278603,0.461701551022782,0,0.23056390438806,0.538545866458633,0.54323685961004,0,0,0,0,0.31396051279005,0,0.451191321234361,0,0,0,0,0,0.326465616318295,0.848118428603645,0.432777279484182,0,0.0884575645033392,0.611030144933625,1.48260564340311,0.494255755786011,0.417687798021821,0.269604531922708,0.802577647298789,0.234264445725339,0.364909578431332,0.19566461893209,0.242780379534093,0,2.41981432097328,0.30607276163049,0.379119477770928,0.300646838828985,0.103688191397247,0,0,0.313932918407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| ||
|short_description=p@chr12:69921143..69921147,+ | |short_description=p@chr12:69921143..69921147,+ | ||
}} | }} |
Latest revision as of 11:55, 24 July 2015
Short description: | p@chr12:69921143..69921147, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69921143..69921147, + |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 1.48e-07 | 1 |
granulosa cell | 1.48e-07 | 1 |
smooth muscle cell of the pulmonary artery | 2.17e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.96e-08 | 1 |
cranial nerve | 5.96e-08 | 1 |
nerve trunk | 5.96e-08 | 1 |
nerve connecting eye with brain | 5.96e-08 | 1 |
nerve | 5.96e-08 | 1 |
retinal neural layer | 5.96e-08 | 1 |
presumptive neural retina | 5.96e-08 | 1 |
left cardiac atrium | 1.22e-07 | 1 |
substantia nigra | 3.17e-07 | 1 |
midbrain nucleus | 3.17e-07 | 1 |
regional part of midbrain | 3.17e-07 | 1 |
midbrain | 3.17e-07 | 1 |
presumptive midbrain | 3.17e-07 | 1 |
midbrain neural tube | 3.17e-07 | 1 |
regional part of diencephalon | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.57e-08 | 1 |
endocrine pancreas cancer | 4.57e-08 | 1 |
pancreatic endocrine carcinoma | 4.57e-08 | 1 |