FFCP PHASE1:Hg19::chr12:8123412..8123418,+: Difference between revisions
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|id=chr12:8123412..8123418,+
|short_description=p@chr12:8123412..8123418,+
|description=CAGE_peak_at_chr12:8123412..8123418,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:8123412..8123418,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr12:8123412..8123418,+ | |||
|id=chr12:8123412..8123418,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.32e-37!140;CL:0000037!1.84e-31!172;CL:0000566!1.84e-31!172;CL:0002032!4.21e-31!165;CL:0000837!4.21e-31!165;CL:0000988!8.81e-30!182;CL:0002087!3.15e-29!119;CL:0002031!1.59e-28!124;CL:0000766!4.84e-20!76;CL:0002057!1.91e-19!42;CL:0000838!5.20e-19!52;CL:0000542!1.73e-18!53;CL:0000051!1.73e-18!53;CL:0000860!1.23e-17!45;CL:0000791!1.10e-16!18;CL:0000789!1.10e-16!18;CL:0002420!1.10e-16!18;CL:0002419!1.10e-16!18;CL:0000790!1.10e-16!18;CL:0000094!1.34e-15!8;CL:0000763!1.26e-13!112;CL:0000049!1.26e-13!112;CL:0000839!2.34e-11!70;CL:0000624!3.01e-11!6;CL:0000557!4.30e-11!71;CL:0000084!6.58e-11!25;CL:0000827!6.58e-11!25;CL:0000081!8.40e-11!11;CL:0002194!2.91e-10!63;CL:0000576!2.91e-10!63;CL:0000040!2.91e-10!63;CL:0000559!2.91e-10!63;CL:0002009!9.53e-10!65;CL:0000625!4.88e-09!11;CL:0000236!5.52e-09!14;CL:0000134!5.79e-09!358;CL:0002320!6.22e-09!365;CL:0002393!1.73e-08!9;CL:0002397!1.73e-08!9;CL:0000775!3.73e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.20e-40;8!CL:0000081;7.20e-29;11!CL:0000775;1.07e-27;3!CL:0000771;3.74e-19;2!CL:0000228;6.32e-10;1!CL:0002372;6.32e-10;1!CL:0000895;6.32e-10;1!CL:0000624;9.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.98e-40,8;CL:0000081,7.06e-29,11;CL:0000775,1.12e-27,3;CL:0000771,3.75e-19,2;CL:0000738,9.32e-12,136;CL:0000228,4.44e-10,1;CL:0002372,4.44e-10,1;CL:0000810,6.33e-10,1;CL:0000895,6.33e-10,1;CL:0002436,6.33e-10,1;CL:0002427,6.33e-10,1;CL:0002428,6.33e-10,1;CL:0002429,6.33e-10,1;CL:0002433,6.33e-10,1;CL:0002431,6.33e-10,1;CL:0002432,6.33e-10,1;CL:0002032,1.53e-09,161;CL:0000837,1.53e-09,161;CL:0000037,4.89e-09,168;CL:0000766,1.87e-08,72;CL:0000988,1.90e-08,177;CL:0000624,9.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002427;6.32e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.01e-11!102;UBERON:0003061!6.01e-11!102;UBERON:0002371!6.91e-10!80;UBERON:0002193!3.66e-09!112;UBERON:0001474!1.10e-08!86;UBERON:0002384!1.20e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:8123412..8123418,+ | |||
}} | }} |
Latest revision as of 12:48, 24 July 2015
Short description: | p@chr12:8123412..8123418, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8123412..8123418, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.98e-40 | 8 |
blood cell | 7.06e-29 | 11 |
neutrophil | 1.12e-27 | 3 |
eosinophil | 3.75e-19 | 2 |
leukocyte | 9.32e-12 | 136 |
multinucleate cell | 4.44e-10 | 1 |
myotube | 4.44e-10 | 1 |
CD4-positive, alpha-beta thymocyte | 6.33e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.33e-10 | 1 |
mature CD4 single-positive thymocyte | 6.33e-10 | 1 |
resting double-positive thymocyte | 6.33e-10 | 1 |
double-positive blast | 6.33e-10 | 1 |
CD69-positive double-positive thymocyte | 6.33e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.33e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.33e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.33e-10 | 1 |
hematopoietic oligopotent progenitor cell | 1.53e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-09 | 161 |
hematopoietic stem cell | 4.89e-09 | 168 |
myeloid leukocyte | 1.87e-08 | 72 |
hematopoietic cell | 1.90e-08 | 177 |
CD4-positive, alpha-beta T cell | 9.69e-07 | 6 |