FFCP PHASE1:Hg19::chr12:9348229..9348233,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:9348229..9348233,+ to FFCP PHASE1:Hg19::chr12:9348229..9348233,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:9348229..9348233,+ | |||
|description=CAGE_peak_at_chr12:9348229..9348233,+ | |||
|id=chr12:9348229..9348233,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.10e-08!5;CL:0000457!4.10e-08!5;CL:0002191!4.10e-08!5;CL:0000097!4.10e-08!5;CL:0000831!4.10e-08!5;CL:0002028!4.10e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.79e-27;5!CL:0000623;3.29e-26;3!CL:0000163;4.20e-15;9!CL:0000625;1.67e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-27,5;CL:0002028,4.92e-27,5;CL:0000623,2.26e-26,3;CL:0000825,2.26e-26,3;CL:0000163,3.84e-15,9;CL:0000047,4.94e-10,8;CL:0000037,7.47e-10,168;CL:0000738,1.78e-09,136;CL:0000988,3.28e-09,177;CL:0002032,5.24e-09,161;CL:0000837,5.24e-09,161;CL:0002031,5.79e-08,120;CL:0000625,1.83e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.36e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-12!115;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0002346!1.87e-07!90;UBERON:0005743!2.32e-07!86;UBERON:0001049!2.93e-07!57;UBERON:0005068!2.93e-07!57;UBERON:0006241!2.93e-07!57;UBERON:0007135!2.93e-07!57;UBERON:0000178!3.23e-07!15;UBERON:0000179!3.23e-07!15;UBERON:0000463!3.23e-07!15;UBERON:0001017!5.87e-07!82;UBERON:0003075!5.96e-07!86;UBERON:0007284!5.96e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.36e-09;1!UBERON:0001389;1.36e-09;1!UBERON:0000026;1.36e-09;1!UBERON:0008784;1.36e-09;1!UBERON:0001785;1.36e-09;1!UBERON:0002464;1.36e-09;1!UBERON:0004904;1.36e-09;1!UBERON:0006058;1.36e-09;1!UBERON:0003663;1.36e-09;1!UBERON:0004256;1.36e-09;1!UBERON:0001021;1.36e-09;1!UBERON:0004708;1.36e-09;1!UBERON:0002101;1.36e-09;1!UBERON:0004709;1.36e-09;1!UBERON:0002529;1.36e-09;1!UBERON:0010538;1.36e-09;1!UBERON:0003661;1.36e-09;1!UBERON:0010890;1.36e-09;1!UBERON:0002471;1.36e-09;1!UBERON:0001383;1.36e-09;1!UBERON:0010758;1.36e-09;1!UBERON:0010707;1.36e-09;1!UBERON:0000978;1.36e-09;1!UBERON:0002103;1.36e-09;1!UBERON:0001665;1.36e-09;1!UBERON:0003823;1.36e-09;1!UBERON:0000154;1.36e-09;1!UBERON:0010709;1.36e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.70e-10,1;UBERON:0001785,9.70e-10,1;UBERON:0002464,9.70e-10,1;UBERON:0004904,9.70e-10,1;UBERON:0001021,9.70e-10,1;UBERON:0003902,9.70e-10,1;UBERON:0005425,9.70e-10,1;UBERON:0005418,1.25e-09,1;UBERON:0001389,1.25e-09,1;UBERON:0000026,1.25e-09,1;UBERON:0008784,1.25e-09,1;UBERON:0006058,1.25e-09,1;UBERON:0003663,1.25e-09,1;UBERON:0004256,1.25e-09,1;UBERON:0004708,1.25e-09,1;UBERON:0002101,1.25e-09,1;UBERON:0004709,1.25e-09,1;UBERON:0002529,1.25e-09,1;UBERON:0010538,1.25e-09,1;UBERON:0003661,1.25e-09,1;UBERON:0010890,1.25e-09,1;UBERON:0002471,1.25e-09,1;UBERON:0001383,1.25e-09,1;UBERON:0004357,1.25e-09,1;UBERON:0004347,1.25e-09,1;UBERON:0005420,1.25e-09,1;UBERON:0005732,1.25e-09,1;UBERON:0010758,1.25e-09,1;UBERON:0010707,1.25e-09,1;UBERON:0000978,1.25e-09,1;UBERON:0002103,1.25e-09,1;UBERON:0001665,1.25e-09,1;UBERON:0003823,1.25e-09,1;UBERON:0000154,1.25e-09,1;UBERON:0010709,1.25e-09,1;UBERON:0005733,1.25e-09,1;UBERON:0005730,1.25e-09,1 | |||
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| ||
|short_description=p@chr12:9348229..9348233,+ | |||
}} | }} |
Latest revision as of 13:39, 24 July 2015
Short description: | p@chr12:9348229..9348233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9348229..9348233, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-27 | 5 |
basophil mast progenitor cell | 4.92e-27 | 5 |
natural killer cell | 2.26e-26 | 3 |
pro-NK cell | 2.26e-26 | 3 |
endocrine cell | 3.84e-15 | 9 |
neuronal stem cell | 4.94e-10 | 8 |
hematopoietic stem cell | 7.47e-10 | 168 |
leukocyte | 1.78e-09 | 136 |
hematopoietic cell | 3.28e-09 | 177 |
hematopoietic oligopotent progenitor cell | 5.24e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.24e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 5.79e-08 | 120 |
CD8-positive, alpha-beta T cell | 1.83e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.70e-10 | 1 |
cranial nerve | 9.70e-10 | 1 |
nerve trunk | 9.70e-10 | 1 |
nerve connecting eye with brain | 9.70e-10 | 1 |
nerve | 9.70e-10 | 1 |
retinal neural layer | 9.70e-10 | 1 |
presumptive neural retina | 9.70e-10 | 1 |
hindlimb bud | 1.25e-09 | 1 |
soleus muscle | 1.25e-09 | 1 |
appendage | 1.25e-09 | 1 |
lower limb segment | 1.25e-09 | 1 |
multi-limb segment region | 1.25e-09 | 1 |
hindlimb muscle | 1.25e-09 | 1 |
hindlimb zeugopod muscle | 1.25e-09 | 1 |
paired limb/fin | 1.25e-09 | 1 |
limb | 1.25e-09 | 1 |
pelvic appendage | 1.25e-09 | 1 |
limb segment | 1.25e-09 | 1 |
paired limb/fin segment | 1.25e-09 | 1 |
limb muscle | 1.25e-09 | 1 |
pelvic complex muscle | 1.25e-09 | 1 |
zeugopod | 1.25e-09 | 1 |
muscle of leg | 1.25e-09 | 1 |
paired limb/fin bud | 1.25e-09 | 1 |
limb bud | 1.25e-09 | 1 |
pelvic appendage bud | 1.25e-09 | 1 |
limb/fin field | 1.25e-09 | 1 |
subdivision of organism along appendicular axis | 1.25e-09 | 1 |
appendage girdle complex | 1.25e-09 | 1 |
leg | 1.25e-09 | 1 |
hindlimb | 1.25e-09 | 1 |
triceps surae | 1.25e-09 | 1 |
hindlimb zeugopod | 1.25e-09 | 1 |
posterior region of body | 1.25e-09 | 1 |
pelvic complex | 1.25e-09 | 1 |
limb field | 1.25e-09 | 1 |
hindlimb/pelvic fin field | 1.25e-09 | 1 |