FFCP PHASE1:Hg19::chr12:95258087..95258088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:95258087..95258088,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_at_chr12:95258087..95258088,- | |description=CAGE_peak_at_chr12:95258087..95258088,- | ||
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|ontology_enrichment_celltype=CL:0000453!5.43e-10!5;CL:0000945!7.30e-07!24;CL:0000826!7.30e-07!24 | |ontology_enrichment_celltype=CL:0000453!5.43e-10!5;CL:0000945!7.30e-07!24;CL:0000826!7.30e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.80e-38;5!CL:0000990;1.50e-21;8!CL:0000451;1.08e-17;10!CL:0000945;2.34e-17;24!CL:0001014;3.00e-07;2!CL:0001016;3.00e-07;2!CL:0002535;4.42e-07;2 | |ontology_enrichment_celltype_v019=CL:0000453;1.80e-38;5!CL:0000990;1.50e-21;8!CL:0000451;1.08e-17;10!CL:0000945;2.34e-17;24!CL:0001014;3.00e-07;2!CL:0001016;3.00e-07;2!CL:0002535;4.42e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.56e-38,5;CL:0000990,1.39e-21,8;CL:0000451,1.02e-17,10;CL:0000945,2.45e-17,24;CL:0000826,2.45e-17,24;CL:0000542,2.90e-10,53;CL:0000051,2.90e-10,53;CL:0000738,5.39e-09,136;CL:0000838,8.23e-08,52;CL:0002032,2.27e-07,161;CL:0000837,2.27e-07,161;CL:0001014,3.09e-07,2;CL:0001016,3.09e-07,2;CL:0000037,5.31e-07,168;CL:0002535,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.82e-13;1 | |ontology_enrichment_development_v019=UBERON:0005425;6.82e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.93e-13;1!DOID:0050177;1.93e-13;1!DOID:0050427;1.93e-13;1!DOID:4960;6.82e-13;1!DOID:0070004;6.82e-13;1!DOID:12603;6.82e-13;1 | |ontology_enrichment_disease_v019=DOID:630;1.93e-13;1!DOID:0050177;1.93e-13;1!DOID:0050427;1.93e-13;1!DOID:4960;6.82e-13;1!DOID:0070004;6.82e-13;1!DOID:12603;6.82e-13;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,2.06e-13,1;DOID:0050177,2.06e-13,1;DOID:0050427,2.06e-13,1;DOID:4960,5.38e-13,1;DOID:0070004,5.38e-13,1;DOID:12603,6.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.16e-29!115;UBERON:0001049!3.91e-21!57;UBERON:0005068!3.91e-21!57;UBERON:0006241!3.91e-21!57;UBERON:0007135!3.91e-21!57;UBERON:0002616!7.19e-16!59;UBERON:0000073!9.52e-15!94;UBERON:0001016!9.52e-15!94;UBERON:0001017!1.61e-14!82;UBERON:0005743!2.65e-14!86;UBERON:0002780!2.77e-14!41;UBERON:0001890!2.77e-14!41;UBERON:0006240!2.77e-14!41;UBERON:0003080!8.59e-14!42;UBERON:0002020!1.82e-13!34;UBERON:0003528!1.82e-13!34;UBERON:0001893!2.95e-13!34;UBERON:0000955!5.34e-13!69;UBERON:0006238!5.34e-13!69;UBERON:0003075!1.44e-12!86;UBERON:0007284!1.44e-12!86;UBERON:0002791!1.65e-12!33;UBERON:0002346!1.38e-11!90;UBERON:0001869!2.49e-11!32;UBERON:0002298!4.63e-09!8;UBERON:0003076!6.94e-09!15;UBERON:0003057!6.94e-09!15;UBERON:0003056!2.09e-08!61;UBERON:0002420!5.85e-08!9;UBERON:0007245!5.85e-08!9;UBERON:0010009!5.85e-08!9;UBERON:0010011!5.85e-08!9;UBERON:0000454!5.85e-08!9;UBERON:0000956!6.10e-08!25;UBERON:0000203!6.10e-08!25;UBERON:0002308!9.21e-08!9;UBERON:0000125!9.21e-08!9;UBERON:0000033!3.23e-07!123;UBERON:0000153!5.48e-07!129;UBERON:0007811!5.48e-07!129;UBERON:0004732!6.13e-07!13;UBERON:0002619!8.52e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!5.16e-29!115;UBERON:0001049!3.91e-21!57;UBERON:0005068!3.91e-21!57;UBERON:0006241!3.91e-21!57;UBERON:0007135!3.91e-21!57;UBERON:0002616!7.19e-16!59;UBERON:0000073!9.52e-15!94;UBERON:0001016!9.52e-15!94;UBERON:0001017!1.61e-14!82;UBERON:0005743!2.65e-14!86;UBERON:0002780!2.77e-14!41;UBERON:0001890!2.77e-14!41;UBERON:0006240!2.77e-14!41;UBERON:0003080!8.59e-14!42;UBERON:0002020!1.82e-13!34;UBERON:0003528!1.82e-13!34;UBERON:0001893!2.95e-13!34;UBERON:0000955!5.34e-13!69;UBERON:0006238!5.34e-13!69;UBERON:0003075!1.44e-12!86;UBERON:0007284!1.44e-12!86;UBERON:0002791!1.65e-12!33;UBERON:0002346!1.38e-11!90;UBERON:0001869!2.49e-11!32;UBERON:0002298!4.63e-09!8;UBERON:0003076!6.94e-09!15;UBERON:0003057!6.94e-09!15;UBERON:0003056!2.09e-08!61;UBERON:0002420!5.85e-08!9;UBERON:0007245!5.85e-08!9;UBERON:0010009!5.85e-08!9;UBERON:0010011!5.85e-08!9;UBERON:0000454!5.85e-08!9;UBERON:0000956!6.10e-08!25;UBERON:0000203!6.10e-08!25;UBERON:0002308!9.21e-08!9;UBERON:0000125!9.21e-08!9;UBERON:0000033!3.23e-07!123;UBERON:0000153!5.48e-07!129;UBERON:0007811!5.48e-07!129;UBERON:0004732!6.13e-07!13;UBERON:0002619!8.52e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;6.82e-13;1!UBERON:0000941;6.82e-13;1!UBERON:0001785;6.82e-13;1!UBERON:0002464;6.82e-13;1!UBERON:0004904;6.82e-13;1!UBERON:0001021;6.82e-13;1!UBERON:0005352;6.82e-13;1!UBERON:0002148;4.42e-07;2!UBERON:0003714;4.42e-07;2!UBERON:0005162;4.42e-07;2!UBERON:0000122;4.42e-07;2!UBERON:0006331;4.42e-07;2!UBERON:0009662;4.42e-07;2!UBERON:0006955;4.42e-07;2!UBERON:0004801;4.42e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001000;6.82e-13;1!UBERON:0000941;6.82e-13;1!UBERON:0001785;6.82e-13;1!UBERON:0002464;6.82e-13;1!UBERON:0004904;6.82e-13;1!UBERON:0001021;6.82e-13;1!UBERON:0005352;6.82e-13;1!UBERON:0002148;4.42e-07;2!UBERON:0003714;4.42e-07;2!UBERON:0005162;4.42e-07;2!UBERON:0000122;4.42e-07;2!UBERON:0006331;4.42e-07;2!UBERON:0009662;4.42e-07;2!UBERON:0006955;4.42e-07;2!UBERON:0004801;4.42e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,4.23e-13,1;UBERON:0005352,4.23e-13,1;UBERON:0000941,6.82e-13,1;UBERON:0001785,6.82e-13,1;UBERON:0002464,6.82e-13,1;UBERON:0004904,6.82e-13,1;UBERON:0001021,6.82e-13,1;UBERON:0003902,6.82e-13,1;UBERON:0005425,6.82e-13,1;UBERON:0003714,4.42e-07,2;UBERON:0005162,4.42e-07,2;UBERON:0000122,4.42e-07,2;UBERON:0002148,5.28e-07,2;UBERON:0006331,5.28e-07,2;UBERON:0009662,5.28e-07,2;UBERON:0006955,5.60e-07,2;UBERON:0004801,5.60e-07,2 | |||
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|short_description=p@chr12:95258087..95258088,- | |short_description=p@chr12:95258087..95258088,- | ||
}} | }} |
Latest revision as of 13:47, 24 July 2015
Short description: | p@chr12:95258087..95258088, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:95258087..95258088, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.56e-38 | 5 |
conventional dendritic cell | 1.39e-21 | 8 |
dendritic cell | 1.02e-17 | 10 |
lymphocyte of B lineage | 2.45e-17 | 24 |
pro-B cell | 2.45e-17 | 24 |
lymphocyte | 2.90e-10 | 53 |
common lymphoid progenitor | 2.90e-10 | 53 |
leukocyte | 5.39e-09 | 136 |
lymphoid lineage restricted progenitor cell | 8.23e-08 | 52 |
hematopoietic oligopotent progenitor cell | 2.27e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-07 | 161 |
CD1a-positive Langerhans cell | 3.09e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.09e-07 | 2 |
hematopoietic stem cell | 5.31e-07 | 168 |
epithelial cell of cervix | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 4.23e-13 | 1 |
spermatic cord | 4.23e-13 | 1 |
cranial nerve II | 6.82e-13 | 1 |
cranial nerve | 6.82e-13 | 1 |
nerve trunk | 6.82e-13 | 1 |
nerve connecting eye with brain | 6.82e-13 | 1 |
nerve | 6.82e-13 | 1 |
retinal neural layer | 6.82e-13 | 1 |
presumptive neural retina | 6.82e-13 | 1 |
neural tissue | 4.42e-07 | 2 |
multi cell component structure | 4.42e-07 | 2 |
neuron projection bundle | 4.42e-07 | 2 |
locus ceruleus | 5.28e-07 | 2 |
brainstem nucleus | 5.28e-07 | 2 |
hindbrain nucleus | 5.28e-07 | 2 |
uterine epithelium | 5.60e-07 | 2 |
cervix epithelium | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.06e-13 | 1 |
monogenic disease | 2.06e-13 | 1 |
xeroderma pigmentosum | 2.06e-13 | 1 |
bone marrow cancer | 5.38e-13 | 1 |
myeloma | 5.38e-13 | 1 |
acute leukemia | 6.06e-13 | 1 |