FFCP PHASE1:Hg19::chr13:110435438..110435457,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:110435438..110435457,-
|short_description=p@chr13:110435438..110435457,-
|description=CAGE_peak_at_chr13:110435438..110435457,-
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:110435438..110435457,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr13:110435438..110435457,- | |||
|id=chr13:110435438..110435457,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;8.01e-27;3!CL:0000047;3.44e-18;2!CL:0000094;1.21e-17;8!CL:0000081;6.94e-13;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,8.05e-27,3;CL:0000094,1.17e-17,8;CL:0000081,6.75e-13,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.04e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.23e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.42e-09;1!UBERON:0002171;1.42e-09;1!UBERON:0000026;1.42e-09;1!UBERON:0008784;1.42e-09;1!UBERON:0006058;1.42e-09;1!UBERON:0003663;1.42e-09;1!UBERON:0004256;1.42e-09;1!UBERON:0004708;1.42e-09;1!UBERON:0002101;1.42e-09;1!UBERON:0004709;1.42e-09;1!UBERON:0006518;1.42e-09;1!UBERON:0008949;1.42e-09;1!UBERON:0002529;1.42e-09;1!UBERON:0010538;1.42e-09;1!UBERON:0003661;1.42e-09;1!UBERON:0010890;1.42e-09;1!UBERON:0002471;1.42e-09;1!UBERON:0001383;1.42e-09;1!UBERON:0000101;1.42e-09;1!UBERON:0010758;1.42e-09;1!UBERON:0010707;1.42e-09;1!UBERON:0000978;1.42e-09;1!UBERON:0002103;1.42e-09;1!UBERON:0001665;1.42e-09;1!UBERON:0003823;1.42e-09;1!UBERON:0000154;1.42e-09;1!UBERON:0010709;1.42e-09;1!UBERON:0002167;1.42e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.62e-09,1;UBERON:0001389,1.62e-09,1;UBERON:0000026,1.62e-09,1;UBERON:0008784,1.62e-09,1;UBERON:0006058,1.62e-09,1;UBERON:0003663,1.62e-09,1;UBERON:0004256,1.62e-09,1;UBERON:0004708,1.62e-09,1;UBERON:0002101,1.62e-09,1;UBERON:0004709,1.62e-09,1;UBERON:0002529,1.62e-09,1;UBERON:0010538,1.62e-09,1;UBERON:0003661,1.62e-09,1;UBERON:0010890,1.62e-09,1;UBERON:0002471,1.62e-09,1;UBERON:0001383,1.62e-09,1;UBERON:0004357,1.62e-09,1;UBERON:0004347,1.62e-09,1;UBERON:0005420,1.62e-09,1;UBERON:0005732,1.62e-09,1;UBERON:0010758,1.62e-09,1;UBERON:0010707,1.62e-09,1;UBERON:0000978,1.62e-09,1;UBERON:0002103,1.62e-09,1;UBERON:0001665,1.62e-09,1;UBERON:0003823,1.62e-09,1;UBERON:0000154,1.62e-09,1;UBERON:0010709,1.62e-09,1;UBERON:0005733,1.62e-09,1;UBERON:0005730,1.62e-09,1;UBERON:0002171,1.76e-09,1;UBERON:0006518,1.76e-09,1;UBERON:0008949,1.76e-09,1;UBERON:0000101,1.76e-09,1;UBERON:0002167,1.76e-09,1 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0.726991193897824,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.112328631146495,0.600707571366025,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,1.77236972004421,0.441463099414651,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,1.15295962733569,0.25248486685276,0.063497894292169,0.763976851116555,1.17217447210047,0,0.102827492703324,0,1.14330573052231,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.646882724578552,0.513372145118994,2.7950408664471,2.60279707715243,0,0.167516265334349,0,16.478154526838,62.8239064328452,15.7477895105693,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.862856803274467,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.368323955743585,0,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,2.3948309234694,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0,1.61207457045891,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,1.51649117541648,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.425149840203366,0.619678821295011,1.11728983594649,0,0,0,0.352675943690684,0,0.128458450192919,1.41696576325585,0.319267718114302,0,0,0.138314504928436,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,1.40696995487696,0,0,0,0,0.682986574053893,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0.9555033757741,0.142953088353313,0,0,0,0,0,2.0486217251274,0.691259661814092,0,0,0,0,0,0,0.955538938977433,0,0,0,1.29485767437579,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.594092800654172,0,0,0.469919589899268,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.378893491091197,0,0.829169439458779,0.103432995861895,0,0,0.322944549180031,0.186224142887574,0.112131862580613,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0.726991193897824,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.112328631146495,0.600707571366025,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,1.77236972004421,0.441463099414651,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,1.15295962733569,0.25248486685276,0.063497894292169,0.763976851116555,1.17217447210047,0,0.102827492703324,0,1.14330573052231,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.646882724578552,0.513372145118994,2.7950408664471,2.60279707715243,0,0.167516265334349,0,16.478154526838,62.8239064328452,15.7477895105693,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.862856803274467,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.368323955743585,0,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,2.3948309234694,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0,1.61207457045891,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,1.24271716604159,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,1.51649117541648,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.425149840203366,0.619678821295011,1.11728983594649,0,0,0,0.352675943690684,0,0.128458450192919,1.41696576325585,0.319267718114302,0,0,0.138314504928436,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,1.40696995487696,0,0,0,0,0.682986574053893,0,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0.9555033757741,0.142953088353313,0,0,0,0,0,2.0486217251274,0.691259661814092,0,0,0,0,0,0,0.955538938977433,0,0,0,1.29485767437579,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.594092800654172,0,0,0.469919589899268,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.378893491091197,0,0.829169439458779,0.103432995861895,0,0,0.322944549180031,0.186224142887574,0.112131862580613,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr13:110435438..110435457,- | |||
}} | }} |
Latest revision as of 14:27, 24 July 2015
Short description: | p@chr13:110435438..110435457, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110435438..110435457, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 8.05e-27 | 3 |
granulocyte | 1.17e-17 | 8 |
blood cell | 6.75e-13 | 11 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.62e-09 | 1 |
soleus muscle | 1.62e-09 | 1 |
appendage | 1.62e-09 | 1 |
lower limb segment | 1.62e-09 | 1 |
multi-limb segment region | 1.62e-09 | 1 |
hindlimb muscle | 1.62e-09 | 1 |
hindlimb zeugopod muscle | 1.62e-09 | 1 |
paired limb/fin | 1.62e-09 | 1 |
limb | 1.62e-09 | 1 |
pelvic appendage | 1.62e-09 | 1 |
limb segment | 1.62e-09 | 1 |
paired limb/fin segment | 1.62e-09 | 1 |
limb muscle | 1.62e-09 | 1 |
pelvic complex muscle | 1.62e-09 | 1 |
zeugopod | 1.62e-09 | 1 |
muscle of leg | 1.62e-09 | 1 |
paired limb/fin bud | 1.62e-09 | 1 |
limb bud | 1.62e-09 | 1 |
pelvic appendage bud | 1.62e-09 | 1 |
limb/fin field | 1.62e-09 | 1 |
subdivision of organism along appendicular axis | 1.62e-09 | 1 |
appendage girdle complex | 1.62e-09 | 1 |
leg | 1.62e-09 | 1 |
hindlimb | 1.62e-09 | 1 |
triceps surae | 1.62e-09 | 1 |
hindlimb zeugopod | 1.62e-09 | 1 |
posterior region of body | 1.62e-09 | 1 |
pelvic complex | 1.62e-09 | 1 |
limb field | 1.62e-09 | 1 |
hindlimb/pelvic fin field | 1.62e-09 | 1 |
lower lobe of right lung | 1.76e-09 | 1 |
right lung lobe | 1.76e-09 | 1 |
lower lobe of lung | 1.76e-09 | 1 |
lobe of lung | 1.76e-09 | 1 |
right lung | 1.76e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.23e-17 | 2 |