FFCP PHASE1:Hg19::chr13:113677163..113677183,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:113677163..113677183,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr13:113677163..113677183,- | |||
|id=chr13:113677163..113677183,- | |||
|ontology_enrichment_celltype=CL:0000066!5.31e-16!254;CL:0000223!6.62e-12!59;CL:0000039!5.73e-10!7;CL:0000586!5.73e-10!7;CL:0002076!1.52e-09!43;CL:0000064!1.27e-07!3;CL:0005012!1.27e-07!3;CL:0000067!1.27e-07!3;CL:0002304!1.27e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.78e-23;3!CL:0000039;3.98e-22;7!CL:0000586;3.98e-22;7!CL:0000317;1.78e-09;2!CL:1000448;1.78e-09;2!CL:0002308;1.78e-09;2!CL:0002140;1.78e-09;2!CL:0002251;3.95e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.35e-23,3;CL:0000039,3.98e-22,7;CL:0000586,3.98e-22,7;CL:0000317,2.02e-09,2;CL:1000448,2.02e-09,2;CL:0002308,2.02e-09,2;CL:0002140,2.02e-09,2;CL:0000066,1.64e-08,253;CL:0002251,3.85e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.50e-27;10!UBERON:0005564;7.50e-27;10 | |||
|ontology_enrichment_disease=DOID:305!1.88e-10!106;DOID:0050687!7.13e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.33e-17;1!DOID:3603;1.33e-17;1!DOID:299;6.01e-11;25!DOID:3493;7.98e-10;2!DOID:4074;1.78e-09;2!DOID:4905;1.78e-09;2!DOID:3498;1.78e-09;2!DOID:3095;1.85e-07;22!DOID:2994;1.85e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.45e-18,106;DOID:3111,1.44e-17,1;DOID:3603,1.44e-17,1;DOID:0050687,3.50e-13,143;DOID:299,6.09e-11,25;DOID:3493,7.98e-10,2;DOID:4074,1.71e-09,2;DOID:4905,1.71e-09,2;DOID:3498,1.71e-09,2;DOID:162,1.32e-07,235;DOID:3095,1.85e-07,22;DOID:2994,1.85e-07,22;DOID:14566,1.99e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.54e-09!12;UBERON:0004119!6.10e-08!169;UBERON:0000925!6.10e-08!169;UBERON:0006595!6.10e-08!169;UBERON:0001778!1.27e-07!3;UBERON:0001775!1.27e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.88e-19;8!UBERON:0000945;2.18e-14;5!UBERON:0010039;2.18e-14;5!UBERON:0003135;2.46e-14;11!UBERON:0000991;5.34e-13;21!UBERON:0002323;1.37e-09;45!UBERON:0002419;1.78e-09;2!UBERON:0007771;1.78e-09;2!UBERON:0003297;1.78e-09;2!UBERON:0001821;1.78e-09;2!UBERON:0003487;1.78e-09;2!UBERON:0001820;1.78e-09;2!UBERON:0003101;1.85e-07;22!UBERON:0000079;1.85e-07;22!UBERON:0002553;3.69e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.88e-19,8;UBERON:0003135,2.46e-14,11;UBERON:0000991,5.43e-13,21;UBERON:0009196,5.43e-13,21;UBERON:0009117,5.43e-13,21;UBERON:0005564,5.43e-13,21;UBERON:0004176,2.04e-12,22;UBERON:0002419,2.02e-09,2;UBERON:0007771,2.02e-09,2;UBERON:0003297,2.02e-09,2;UBERON:0001821,2.02e-09,2;UBERON:0003487,2.02e-09,2;UBERON:0001820,2.02e-09,2;UBERON:0005089,2.02e-09,2;UBERON:0005088,2.02e-09,2;UBERON:0000945,2.25e-09,8;UBERON:0010039,2.25e-09,8;UBERON:0002323,4.75e-09,46;UBERON:0004458,1.70e-08,49;UBERON:0003886,1.04e-07,54;UBERON:0003101,1.85e-07,22;UBERON:0000079,1.85e-07,22;UBERON:0002553,8.08e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.463721619900307,0,0.721832238805369,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0.358042349351218,0,0.394573622547734,0,0,0,0,0,0,0,0,3.30001000027949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.69169171316418,0.628303510868405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.292357268344742,0,0.193978032976839,0,0,0,0,0,0,0,0,0,2.59362750877391,0,0,1.58460277786965,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.606631894687664,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.758245587708239,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,2.24142474360707,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2004504608925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.378499274505237,0.437062287854782,0,6.83325159271278,3.20660886318673,2.38926738790597,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr13:113677163..113677183,- | |||
}} |
Latest revision as of 14:43, 24 July 2015
Short description: | p@chr13:113677163..113677183, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:113677163..113677183, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.35e-23 | 3 |
germ line cell | 3.98e-22 | 7 |
germ cell | 3.98e-22 | 7 |
sebum secreting cell | 2.02e-09 | 2 |
epithelial cell of sweat gland | 2.02e-09 | 2 |
epithelial cell of skin gland | 2.02e-09 | 2 |
acinar cell of sebaceous gland | 2.02e-09 | 2 |
epithelial cell | 1.64e-08 | 253 |
epithelial cell of alimentary canal | 3.85e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 1.88e-19 | 8 |
male reproductive organ | 2.46e-14 | 11 |
gonad | 5.43e-13 | 21 |
indifferent external genitalia | 5.43e-13 | 21 |
indifferent gonad | 5.43e-13 | 21 |
gonad primordium | 5.43e-13 | 21 |
external genitalia | 2.04e-12 | 22 |
skin gland | 2.02e-09 | 2 |
epidermis gland | 2.02e-09 | 2 |
gland of integumental system | 2.02e-09 | 2 |
sebaceous gland | 2.02e-09 | 2 |
skin sebaceous gland | 2.02e-09 | 2 |
sweat gland | 2.02e-09 | 2 |
sweat gland placode | 2.02e-09 | 2 |
sebaceous gland placode | 2.02e-09 | 2 |
stomach | 2.25e-09 | 8 |
food storage organ | 2.25e-09 | 8 |
body cavity | 4.75e-09 | 46 |
body cavity or lining | 1.70e-08 | 49 |
body cavity precursor | 1.04e-07 | 54 |
male organism | 1.85e-07 | 22 |
male reproductive system | 1.85e-07 | 22 |
anatomical cavity | 8.08e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.45e-18 | 106 |
cystadenocarcinoma | 1.44e-17 | 1 |
mucinous cystadenocarcinoma | 1.44e-17 | 1 |
cell type cancer | 3.50e-13 | 143 |
adenocarcinoma | 6.09e-11 | 25 |
signet ring cell adenocarcinoma | 7.98e-10 | 2 |
pancreas adenocarcinoma | 1.71e-09 | 2 |
pancreatic carcinoma | 1.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.71e-09 | 2 |
cancer | 1.32e-07 | 235 |
germ cell and embryonal cancer | 1.85e-07 | 22 |
germ cell cancer | 1.85e-07 | 22 |
disease of cellular proliferation | 1.99e-07 | 239 |