FFCP PHASE1:Hg19::chr13:42179573..42179585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:42179573..42179585,- | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_at_chr13:42179573..42179585,- | |description=CAGE_peak_at_chr13:42179573..42179585,- | ||
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|ontology_enrichment_celltype=CL:0000181!1.43e-29!12;CL:0000417!1.43e-29!12;CL:0000668!1.43e-29!12;CL:0000414!1.43e-29!12;CL:0000412!1.43e-29!12;CL:0000182!1.43e-29!12;CL:0002563!4.11e-23!4;CL:0000223!3.34e-18!59;CL:0002253!1.85e-12!2;CL:0002231!8.96e-09!3 | |ontology_enrichment_celltype=CL:0000181!1.43e-29!12;CL:0000417!1.43e-29!12;CL:0000668!1.43e-29!12;CL:0000414!1.43e-29!12;CL:0000412!1.43e-29!12;CL:0000182!1.43e-29!12;CL:0002563!4.11e-23!4;CL:0000223!3.34e-18!59;CL:0002253!1.85e-12!2;CL:0002231!8.96e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.96e-34;2!CL:0002231;3.66e-23;3!CL:0002563;9.45e-18;4!CL:0002076;1.30e-08;42!CL:0000182;7.48e-07;12 | |ontology_enrichment_celltype_v019=CL:0002253;5.96e-34;2!CL:0002231;3.66e-23;3!CL:0002563;9.45e-18;4!CL:0002076;1.30e-08;42!CL:0000182;7.48e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.05e-34,2;CL:0002231,3.27e-23,3;CL:0002563,1.03e-17,4;CL:0000223,2.67e-11,58;CL:0002076,2.17e-07,42;CL:0000182,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.09e-10;31!UBERON:0004161;2.32e-07;11!CL:0000223;7.35e-07;58 | |ontology_enrichment_development_v019=UBERON:0003104;6.09e-10;31!UBERON:0004161;2.32e-07;11!CL:0000223;7.35e-07;58 | ||
|ontology_enrichment_disease=DOID:4960!2.62e-23!1;DOID:0070004!2.62e-23!1;DOID:7!2.04e-09!39 | |ontology_enrichment_disease=DOID:4960!2.62e-23!1;DOID:0070004!2.62e-23!1;DOID:7!2.04e-09!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!4.11e-23!4;UBERON:0001262!4.11e-23!4;UBERON:0004786!4.11e-23!4;UBERON:0004808!4.11e-23!4;UBERON:0001277!4.11e-23!4;UBERON:0003929!6.87e-20!54;UBERON:0002107!6.99e-19!19;UBERON:0006925!6.99e-19!19;UBERON:0008836!6.99e-19!19;UBERON:0003350!1.04e-18!5;UBERON:0008835!2.25e-16!22;UBERON:0003894!2.25e-16!22;UBERON:0009854!1.10e-15!23;UBERON:0007499!1.82e-14!25;UBERON:0009497!1.82e-14!25;UBERON:0000015!1.82e-14!25;UBERON:0002423!1.82e-14!25;UBERON:0006235!1.82e-14!25;UBERON:0004161!1.82e-14!25;UBERON:0005057!6.31e-14!26;UBERON:0009856!6.31e-14!26;UBERON:0005911!4.47e-13!82;UBERON:0002365!9.49e-12!31;UBERON:0002330!9.49e-12!31;UBERON:0000485!7.58e-11!9;UBERON:0002368!1.88e-10!35;UBERON:0002530!1.60e-09!59;UBERON:0000344!2.29e-08!12;UBERON:0000060!2.29e-08!12;UBERON:0000949!3.30e-08!45;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0000490!1.07e-07!138;UBERON:0001052!7.27e-07!4;UBERON:0002405!8.66e-07!115;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155;UBERON:0005172!9.00e-07!55;UBERON:0005173!9.00e-07!55 | |ontology_enrichment_uberon=UBERON:0001242!4.11e-23!4;UBERON:0001262!4.11e-23!4;UBERON:0004786!4.11e-23!4;UBERON:0004808!4.11e-23!4;UBERON:0001277!4.11e-23!4;UBERON:0003929!6.87e-20!54;UBERON:0002107!6.99e-19!19;UBERON:0006925!6.99e-19!19;UBERON:0008836!6.99e-19!19;UBERON:0003350!1.04e-18!5;UBERON:0008835!2.25e-16!22;UBERON:0003894!2.25e-16!22;UBERON:0009854!1.10e-15!23;UBERON:0007499!1.82e-14!25;UBERON:0009497!1.82e-14!25;UBERON:0000015!1.82e-14!25;UBERON:0002423!1.82e-14!25;UBERON:0006235!1.82e-14!25;UBERON:0004161!1.82e-14!25;UBERON:0005057!6.31e-14!26;UBERON:0009856!6.31e-14!26;UBERON:0005911!4.47e-13!82;UBERON:0002365!9.49e-12!31;UBERON:0002330!9.49e-12!31;UBERON:0000485!7.58e-11!9;UBERON:0002368!1.88e-10!35;UBERON:0002530!1.60e-09!59;UBERON:0000344!2.29e-08!12;UBERON:0000060!2.29e-08!12;UBERON:0000949!3.30e-08!45;UBERON:0004921!3.49e-08!129;UBERON:0004185!3.49e-08!129;UBERON:0000490!1.07e-07!138;UBERON:0001052!7.27e-07!4;UBERON:0002405!8.66e-07!115;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155;UBERON:0005172!9.00e-07!55;UBERON:0005173!9.00e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;9.45e-18;4!UBERON:0001242;9.45e-18;4!UBERON:0001262;9.45e-18;4!UBERON:0004786;9.45e-18;4!UBERON:0004808;9.45e-18;4!UBERON:0001277;9.45e-18;4!UBERON:0004907;1.71e-14;5!UBERON:0000485;9.43e-11;7!UBERON:0003929;9.43e-11;7!UBERON:0003350;1.41e-09;8!UBERON:0001155;1.16e-08;9!UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0000059;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001052;9.45e-18;4!UBERON:0001242;9.45e-18;4!UBERON:0001262;9.45e-18;4!UBERON:0004786;9.45e-18;4!UBERON:0004808;9.45e-18;4!UBERON:0001277;9.45e-18;4!UBERON:0004907;1.71e-14;5!UBERON:0000485;9.43e-11;7!UBERON:0003929;9.43e-11;7!UBERON:0003350;1.41e-09;8!UBERON:0001155;1.16e-08;9!UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0000059;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0001046,5.66e-15,19;UBERON:0004907,1.83e-14,5;UBERON:0003929,4.68e-12,54;UBERON:0003350,1.47e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000485,1.21e-08,9;UBERON:0005911,2.70e-08,82;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0000059,2.63e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
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|short_description=p@chr13:42179573..42179585,- | |short_description=p@chr13:42179573..42179585,- | ||
}} | }} |
Latest revision as of 16:03, 24 July 2015
Short description: | p@chr13:42179573..42179585, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42179573..42179585, - |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.05e-34 | 2 |
epithelial cell of prostate | 3.27e-23 | 3 |
intestinal epithelial cell | 1.03e-17 | 4 |
endodermal cell | 2.67e-11 | 58 |
endo-epithelial cell | 2.17e-07 | 42 |
hepatocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.03e-17 | 4 |
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
hindgut | 5.66e-15 | 19 |
lower digestive tract | 1.83e-14 | 5 |
gut epithelium | 4.68e-12 | 54 |
epithelium of mucosa | 1.47e-09 | 8 |
colon | 1.21e-08 | 9 |
simple columnar epithelium | 1.21e-08 | 9 |
endo-epithelium | 2.70e-08 | 82 |
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
large intestine | 2.63e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |