FFCP PHASE1:Hg19::chr13:44980101..44980132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_uc001uzl.2_5end | |association_with_transcript=-80bp_to_uc001uzl.2_5end | ||
|cluster_id=chr13:44980101..44980132,- | |||
|description=CAGE_peak_1_at_uc001uzl.2_5end | |description=CAGE_peak_1_at_uc001uzl.2_5end | ||
|id=chr13:44980101..44980132,- | |id=chr13:44980101..44980132,- | ||
|ontology_enrichment_celltype=CL:0000181!2.60e-11!12;CL:0000417!2.60e-11!12;CL:0000668!2.60e-11!12;CL:0000414!2.60e-11!12;CL:0000412!2.60e-11!12;CL:0000182!2.60e-11!12;CL:0000039!1.55e-08!7;CL:0000586!1.55e-08!7 | |ontology_enrichment_celltype=CL:0000181!2.60e-11!12;CL:0000417!2.60e-11!12;CL:0000668!2.60e-11!12;CL:0000414!2.60e-11!12;CL:0000412!2.60e-11!12;CL:0000182!2.60e-11!12;CL:0000039!1.55e-08!7;CL:0000586!1.55e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-24;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.60e-24;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-24,12;CL:0000223,5.63e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.79e-17;11!UBERON:0009497;1.48e-14;13!UBERON:0008801;5.70e-13;1!UBERON:0006595;9.21e-08;86!UBERON:0007297;2.35e-07;2 | |ontology_enrichment_development_v019=UBERON:0004161;3.79e-17;11!UBERON:0009497;1.48e-14;13!UBERON:0008801;5.70e-13;1!UBERON:0006595;9.21e-08;86!UBERON:0007297;2.35e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;2.58e-07;2 | |ontology_enrichment_disease_v019=DOID:3493;2.58e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.58e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;3.75e-24;2!UBERON:0005058;3.75e-24;2!UBERON:0009113;3.75e-24;2!UBERON:0002365;2.46e-22;31!UBERON:0002330;2.46e-22;31!UBERON:0002107;8.68e-22;19!UBERON:0006925;8.68e-22;19!UBERON:0002368;1.39e-17;33!UBERON:0002423;1.70e-16;25!UBERON:0002530;2.31e-16;57!UBERON:0000949;3.19e-14;43!UBERON:0001301;1.93e-13;1!UBERON:0001831;5.70e-13;1!UBERON:0001567;5.70e-13;1!UBERON:0002108;2.97e-10;4!UBERON:0004177;2.97e-10;5!UBERON:0005057;2.97e-10;5!UBERON:0001044;1.08e-08;6!UBERON:0003293;1.08e-08;6!UBERON:0003294;1.08e-08;6!UBERON:0010047;1.08e-08;6!UBERON:0003408;1.08e-08;6!UBERON:0000167;1.08e-08;6!UBERON:0001041;3.96e-08;14!UBERON:0004921;1.65e-07;33!UBERON:0001007;2.49e-07;81!UBERON:0001829;4.04e-07;2!UBERON:0004089;4.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.75e-24;2!UBERON:0005058;3.75e-24;2!UBERON:0009113;3.75e-24;2!UBERON:0002365;2.46e-22;31!UBERON:0002330;2.46e-22;31!UBERON:0002107;8.68e-22;19!UBERON:0006925;8.68e-22;19!UBERON:0002368;1.39e-17;33!UBERON:0002423;1.70e-16;25!UBERON:0002530;2.31e-16;57!UBERON:0000949;3.19e-14;43!UBERON:0001301;1.93e-13;1!UBERON:0001831;5.70e-13;1!UBERON:0001567;5.70e-13;1!UBERON:0002108;2.97e-10;4!UBERON:0004177;2.97e-10;5!UBERON:0005057;2.97e-10;5!UBERON:0001044;1.08e-08;6!UBERON:0003293;1.08e-08;6!UBERON:0003294;1.08e-08;6!UBERON:0010047;1.08e-08;6!UBERON:0003408;1.08e-08;6!UBERON:0000167;1.08e-08;6!UBERON:0001041;3.96e-08;14!UBERON:0004921;1.65e-07;33!UBERON:0001007;2.49e-07;81!UBERON:0001829;4.04e-07;2!UBERON:0004089;4.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.53e-23,31;UBERON:0002330,3.53e-23,31;UBERON:0002530,1.79e-22,59;UBERON:0002107,8.23e-22,19;UBERON:0006925,8.23e-22,19;UBERON:0008836,8.23e-22,19;UBERON:0002368,1.59e-20,35;UBERON:0003408,7.54e-19,10;UBERON:0008835,8.40e-19,22;UBERON:0003894,8.40e-19,22;UBERON:0009854,5.67e-18,23;UBERON:0004921,2.26e-17,118;UBERON:0007499,1.64e-16,25;UBERON:0009497,1.64e-16,25;UBERON:0000015,1.64e-16,25;UBERON:0002423,1.64e-16,25;UBERON:0006235,1.64e-16,25;UBERON:0004161,1.64e-16,25;UBERON:0003929,1.71e-16,54;UBERON:0009856,7.24e-16,26;UBERON:0000949,8.65e-16,45;UBERON:0001041,8.20e-15,87;UBERON:0001007,8.04e-14,145;UBERON:0001555,8.04e-14,145;UBERON:0007026,8.04e-14,145;UBERON:0001301,1.82e-13,1;UBERON:0001831,8.64e-13,1;UBERON:0001567,8.64e-13,1;UBERON:0008801,8.64e-13,1;UBERON:0002370,1.10e-12,4;UBERON:0005058,1.10e-12,4;UBERON:0009113,1.10e-12,4;UBERON:0003295,1.10e-12,4;UBERON:0005562,1.10e-12,4;UBERON:0004119,2.33e-12,160;UBERON:0000925,2.33e-12,160;UBERON:0006595,2.33e-12,160;UBERON:0005911,1.68e-10,82;UBERON:0002108,4.12e-10,4;UBERON:0005172,4.61e-10,54;UBERON:0005173,4.61e-10,54;UBERON:0002417,5.42e-09,60;UBERON:0000916,5.42e-09,60;UBERON:0003351,9.27e-09,6;UBERON:0001044,1.22e-08,6;UBERON:0003293,1.22e-08,6;UBERON:0003294,1.22e-08,6;UBERON:0010047,1.22e-08,6;UBERON:0000167,1.22e-08,6;UBERON:0011216,3.35e-08,223;UBERON:0004177,1.25e-07,7;UBERON:0005057,1.25e-07,7;UBERON:0001829,4.98e-07,2;UBERON:0004089,4.98e-07,2 | |||
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|short_description=p1@uc001uzl.2 | |short_description=p1@uc001uzl.2 | ||
}} | }} |
Latest revision as of 16:11, 24 July 2015
Short description: | p1@uc001uzl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001uzl.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_uc001uzl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.85e-24 | 12 |
endodermal cell | 5.63e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.58e-07 | 2 |