FFCP PHASE1:Hg19::chr13:73985719..73985757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:73985719..73985757,+ | |||
|description=CAGE_peak_at_chr13:73985719..73985757,+ | |||
|id=chr13:73985719..73985757,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.18e-13!43;CL:0000066!2.26e-09!254;CL:0000223!1.04e-08!59;CL:0002251!2.14e-07!21;CL:0002178!2.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.00e-22;3!CL:0000197;5.84e-12;6!CL:0000098;5.84e-12;6!CL:0002167;5.84e-12;6!CL:0002231;5.80e-07;3!CL:0002328;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.00e-22,3;CL:0000197,6.00e-12,6;CL:0000098,6.00e-12,6;CL:0002167,6.00e-12,6;CL:0002231,5.80e-07,3;CL:0002328,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.32e-15!14;DOID:3493!9.11e-11!2;DOID:1909!2.67e-10!2;DOID:305!1.69e-08!106;DOID:0050687!4.48e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.52e-34;2!DOID:3151;5.26e-18;1!DOID:3149;5.26e-18;1!DOID:3451;1.12e-09;2!DOID:4159;1.12e-09;2!DOID:0060122;1.12e-09;2!DOID:1909;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.29e-34,2;DOID:3151,5.26e-18,1;DOID:3149,5.26e-18,1;DOID:3451,1.12e-09,2;DOID:4159,1.12e-09,2;DOID:0060122,1.12e-09,2;DOID:1909,1.86e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;4.69e-14;5!UBERON:0010039;4.69e-14;5!UBERON:0004815;9.37e-07;3!UBERON:0002031;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,3.86e-09,8;UBERON:0010039,3.86e-09,8;UBERON:0004815,8.62e-07,3;UBERON:0002031,8.62e-07,3 | |||
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| ||
|short_description=p@chr13:73985719..73985757,+ | |||
}} | }} |
Latest revision as of 17:02, 24 July 2015
Short description: | p@chr13:73985719..73985757, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:73985719..73985757, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.00e-22 | 3 |
receptor cell | 6.00e-12 | 6 |
sensory epithelial cell | 6.00e-12 | 6 |
olfactory epithelial cell | 6.00e-12 | 6 |
epithelial cell of prostate | 5.80e-07 | 3 |
bronchial epithelial cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 3.86e-09 | 8 |
food storage organ | 3.86e-09 | 8 |
lower respiratory tract epithelium | 8.62e-07 | 3 |
epithelium of bronchus | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.29e-34 | 2 |
skin squamous cell carcinoma | 5.26e-18 | 1 |
keratoacanthoma | 5.26e-18 | 1 |
skin carcinoma | 1.12e-09 | 2 |
skin cancer | 1.12e-09 | 2 |
integumentary system cancer | 1.12e-09 | 2 |
melanoma | 1.86e-09 | 2 |