FFCP PHASE1:Hg19::chr13:74071880..74071894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:74071880..74071894,+ | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr13:74071880..74071894,+ | |description=CAGE_peak_at_chr13:74071880..74071894,+ | ||
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|ontology_enrichment_celltype=CL:0002159!1.58e-31!13;CL:0002076!7.64e-22!43;CL:0000066!1.22e-21!254;CL:0000076!1.15e-18!62;CL:0000223!5.22e-17!59;CL:0002077!1.78e-16!33;CL:0002251!3.71e-15!21;CL:0000362!9.56e-14!8;CL:0002166!1.74e-13!3;CL:0000240!1.73e-11!6;CL:0000311!1.73e-11!6;CL:0000079!1.73e-11!6;CL:0000237!1.73e-11!6;CL:0000036!1.73e-11!6;CL:0000357!1.73e-11!6;CL:0000114!1.73e-11!6;CL:0002368!2.73e-11!13;CL:0000317!2.65e-10!2;CL:1000448!2.65e-10!2;CL:0002308!2.65e-10!2;CL:0002140!2.65e-10!2;CL:0000575!2.10e-09!2;CL:0000220!1.01e-08!246;CL:0000622!1.07e-08!5;CL:0002321!1.34e-08!248;CL:0000221!1.87e-08!71;CL:0000312!2.43e-08!5;CL:0000154!2.60e-07!6 | |ontology_enrichment_celltype=CL:0002159!1.58e-31!13;CL:0002076!7.64e-22!43;CL:0000066!1.22e-21!254;CL:0000076!1.15e-18!62;CL:0000223!5.22e-17!59;CL:0002077!1.78e-16!33;CL:0002251!3.71e-15!21;CL:0000362!9.56e-14!8;CL:0002166!1.74e-13!3;CL:0000240!1.73e-11!6;CL:0000311!1.73e-11!6;CL:0000079!1.73e-11!6;CL:0000237!1.73e-11!6;CL:0000036!1.73e-11!6;CL:0000357!1.73e-11!6;CL:0000114!1.73e-11!6;CL:0002368!2.73e-11!13;CL:0000317!2.65e-10!2;CL:1000448!2.65e-10!2;CL:0002308!2.65e-10!2;CL:0002140!2.65e-10!2;CL:0000575!2.10e-09!2;CL:0000220!1.01e-08!246;CL:0000622!1.07e-08!5;CL:0002321!1.34e-08!248;CL:0000221!1.87e-08!71;CL:0000312!2.43e-08!5;CL:0000154!2.60e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.48e-24;2!CL:1000448;2.48e-24;2!CL:0002308;2.48e-24;2!CL:0002140;2.48e-24;2!CL:0002252;7.24e-13;1!CL:0000362;2.46e-12;9!CL:0000622;2.53e-10;5!CL:0002251;1.28e-09;20!CL:0000154;9.45e-09;6!CL:0002076;1.84e-08;42!CL:0002159;4.01e-08;14!CL:0000076;4.41e-08;63 | |ontology_enrichment_celltype_v019=CL:0000317;2.48e-24;2!CL:1000448;2.48e-24;2!CL:0002308;2.48e-24;2!CL:0002140;2.48e-24;2!CL:0002252;7.24e-13;1!CL:0000362;2.46e-12;9!CL:0000622;2.53e-10;5!CL:0002251;1.28e-09;20!CL:0000154;9.45e-09;6!CL:0002076;1.84e-08;42!CL:0002159;4.01e-08;14!CL:0000076;4.41e-08;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.64e-24,2;CL:1000448,1.64e-24,2;CL:0002308,1.64e-24,2;CL:0002140,1.64e-24,2;CL:0000076,1.92e-17,63;CL:0002252,6.06e-13,1;CL:0000362,2.23e-12,9;CL:0000622,2.14e-10,5;CL:0002076,1.11e-09,42;CL:0002251,1.34e-09,20;CL:0000154,8.24e-09,6;CL:0000066,1.78e-08,253;CL:0002159,3.77e-08,14;CL:0000223,6.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.55e-07;2!UBERON:0010056;4.55e-07;2 | |ontology_enrichment_development_v019=UBERON:0008814;4.55e-07;2!UBERON:0010056;4.55e-07;2 | ||
|ontology_enrichment_disease=DOID:1749!4.15e-30!14 | |ontology_enrichment_disease=DOID:1749!4.15e-30!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.18e-40;14!DOID:3151;1.82e-13;1!DOID:3149;1.82e-13;1!DOID:3451;2.28e-07;2!DOID:4159;2.28e-07;2!DOID:0060122;2.28e-07;2 | |ontology_enrichment_disease_v019=DOID:1749;1.18e-40;14!DOID:3151;1.82e-13;1!DOID:3149;1.82e-13;1!DOID:3451;2.28e-07;2!DOID:4159;2.28e-07;2!DOID:0060122;2.28e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.42e-40,14;DOID:3151,1.82e-13,1;DOID:3149,1.82e-13,1;DOID:3451,2.28e-07,2;DOID:4159,2.28e-07,2;DOID:0060122,2.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.18e-21!5;UBERON:0003343!4.21e-18!4;UBERON:0004785!4.21e-18!4;UBERON:0000344!1.56e-12!12;UBERON:0003102!5.83e-12!95;UBERON:0001003!9.28e-11!14;UBERON:0007376!9.28e-11!14;UBERON:0007383!9.28e-11!14;UBERON:0002419!2.65e-10!2;UBERON:0007771!2.65e-10!2;UBERON:0003297!2.65e-10!2;UBERON:0001821!2.65e-10!2;UBERON:0003487!2.65e-10!2;UBERON:0001820!2.65e-10!2;UBERON:0005089!2.65e-10!2;UBERON:0005088!2.65e-10!2;UBERON:0001708!3.10e-10!4;UBERON:0001704!3.10e-10!4;UBERON:0000166!2.81e-09!21;UBERON:0000165!1.31e-08!28;UBERON:0000930!1.31e-08!28;UBERON:0000365!1.49e-08!5;UBERON:0000161!1.74e-08!35;UBERON:0001004!2.49e-07!72;UBERON:0000974!2.82e-07!10;UBERON:0005910!3.42e-07!6;UBERON:0001444!4.73e-07!48;UBERON:0002090!5.79e-07!6 | |ontology_enrichment_uberon=UBERON:0003729!1.18e-21!5;UBERON:0003343!4.21e-18!4;UBERON:0004785!4.21e-18!4;UBERON:0000344!1.56e-12!12;UBERON:0003102!5.83e-12!95;UBERON:0001003!9.28e-11!14;UBERON:0007376!9.28e-11!14;UBERON:0007383!9.28e-11!14;UBERON:0002419!2.65e-10!2;UBERON:0007771!2.65e-10!2;UBERON:0003297!2.65e-10!2;UBERON:0001821!2.65e-10!2;UBERON:0003487!2.65e-10!2;UBERON:0001820!2.65e-10!2;UBERON:0005089!2.65e-10!2;UBERON:0005088!2.65e-10!2;UBERON:0001708!3.10e-10!4;UBERON:0001704!3.10e-10!4;UBERON:0000166!2.81e-09!21;UBERON:0000165!1.31e-08!28;UBERON:0000930!1.31e-08!28;UBERON:0000365!1.49e-08!5;UBERON:0000161!1.74e-08!35;UBERON:0001004!2.49e-07!72;UBERON:0000974!2.82e-07!10;UBERON:0005910!3.42e-07!6;UBERON:0001444!4.73e-07!48;UBERON:0002090!5.79e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.15e-27;4!UBERON:0004785;5.15e-27;4!UBERON:0002419;2.48e-24;2!UBERON:0007771;2.48e-24;2!UBERON:0003297;2.48e-24;2!UBERON:0001821;2.48e-24;2!UBERON:0003487;2.48e-24;2!UBERON:0001820;2.48e-24;2!UBERON:0000974;3.04e-18;6!UBERON:0000997;7.24e-13;1!UBERON:0005056;7.24e-13;1!UBERON:0004176;7.24e-13;1!UBERON:0003729;9.87e-09;13!UBERON:0001003;1.29e-07;15!UBERON:0007376;1.29e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0003343;5.15e-27;4!UBERON:0004785;5.15e-27;4!UBERON:0002419;2.48e-24;2!UBERON:0007771;2.48e-24;2!UBERON:0003297;2.48e-24;2!UBERON:0001821;2.48e-24;2!UBERON:0003487;2.48e-24;2!UBERON:0001820;2.48e-24;2!UBERON:0000974;3.04e-18;6!UBERON:0000997;7.24e-13;1!UBERON:0005056;7.24e-13;1!UBERON:0004176;7.24e-13;1!UBERON:0003729;9.87e-09;13!UBERON:0001003;1.29e-07;15!UBERON:0007376;1.29e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.03e-27,4;UBERON:0004785,7.03e-27,4;UBERON:0002419,1.64e-24,2;UBERON:0007771,1.64e-24,2;UBERON:0003297,1.64e-24,2;UBERON:0001821,1.64e-24,2;UBERON:0003487,1.64e-24,2;UBERON:0001820,1.64e-24,2;UBERON:0005089,1.64e-24,2;UBERON:0005088,1.64e-24,2;UBERON:0000997,6.82e-13,1;UBERON:0005056,6.82e-13,1;UBERON:0000974,3.88e-11,10;UBERON:0003729,1.08e-08,13;UBERON:0001003,1.22e-07,15;UBERON:0007376,1.22e-07,15;UBERON:0007383,1.22e-07,15 | |||
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|short_description=p@chr13:74071880..74071894,+ | |short_description=p@chr13:74071880..74071894,+ | ||
}} | }} |
Latest revision as of 17:02, 24 July 2015
Short description: | p@chr13:74071880..74071894, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74071880..74071894, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.64e-24 | 2 |
epithelial cell of sweat gland | 1.64e-24 | 2 |
epithelial cell of skin gland | 1.64e-24 | 2 |
acinar cell of sebaceous gland | 1.64e-24 | 2 |
squamous epithelial cell | 1.92e-17 | 63 |
epithelial cell of esophagus | 6.06e-13 | 1 |
epidermal cell | 2.23e-12 | 9 |
acinar cell | 2.14e-10 | 5 |
endo-epithelial cell | 1.11e-09 | 42 |
epithelial cell of alimentary canal | 1.34e-09 | 20 |
protein secreting cell | 8.24e-09 | 6 |
epithelial cell | 1.78e-08 | 253 |
general ecto-epithelial cell | 3.77e-08 | 14 |
endodermal cell | 6.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.03e-27 | 4 |
respiratory system mucosa | 7.03e-27 | 4 |
skin gland | 1.64e-24 | 2 |
epidermis gland | 1.64e-24 | 2 |
gland of integumental system | 1.64e-24 | 2 |
sebaceous gland | 1.64e-24 | 2 |
skin sebaceous gland | 1.64e-24 | 2 |
sweat gland | 1.64e-24 | 2 |
sweat gland placode | 1.64e-24 | 2 |
sebaceous gland placode | 1.64e-24 | 2 |
mammalian vulva | 6.82e-13 | 1 |
external female genitalia | 6.82e-13 | 1 |
neck | 3.88e-11 | 10 |
mouth mucosa | 1.08e-08 | 13 |
skin epidermis | 1.22e-07 | 15 |
outer epithelium | 1.22e-07 | 15 |
enveloping layer of ectoderm | 1.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.42e-40 | 14 |
skin squamous cell carcinoma | 1.82e-13 | 1 |
keratoacanthoma | 1.82e-13 | 1 |
skin carcinoma | 2.28e-07 | 2 |
skin cancer | 2.28e-07 | 2 |
integumentary system cancer | 2.28e-07 | 2 |