FFCP PHASE1:Hg19::chr13:93439916..93439921,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:93439916..93439921,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr13:93439916..93439921,- | |description=CAGE_peak_at_chr13:93439916..93439921,- | ||
|id=chr13:93439916..93439921,- | |id=chr13:93439916..93439921,- | ||
|ontology_enrichment_celltype=CL:0000047!9.28e-19!8;CL:0000214!7.86e-13!3;CL:0000167!1.08e-10!1;CL:0000164!1.08e-10!1;CL:0000502!1.08e-10!1;CL:0000172!1.08e-10!1;CL:0000173!1.08e-10!1;CL:0002351!1.08e-10!1;CL:0000864!1.57e-10!1;CL:0000091!1.57e-10!1;CL:0000946!4.75e-10!1;CL:0000786!4.75e-10!1;CL:0000980!4.75e-10!1;CL:0000153!1.95e-09!9;CL:0000447!1.95e-09!9;CL:0000540!4.00e-07!6;CL:0000031!4.00e-07!6;CL:0000404!4.00e-07!6 | |ontology_enrichment_celltype=CL:0000047!9.28e-19!8;CL:0000214!7.86e-13!3;CL:0000167!1.08e-10!1;CL:0000164!1.08e-10!1;CL:0000502!1.08e-10!1;CL:0000172!1.08e-10!1;CL:0000173!1.08e-10!1;CL:0002351!1.08e-10!1;CL:0000864!1.57e-10!1;CL:0000091!1.57e-10!1;CL:0000946!4.75e-10!1;CL:0000786!4.75e-10!1;CL:0000980!4.75e-10!1;CL:0000153!1.95e-09!9;CL:0000447!1.95e-09!9;CL:0000540!4.00e-07!6;CL:0000031!4.00e-07!6;CL:0000404!4.00e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.05e-34;1!CL:0000164;5.05e-34;1!CL:0000502;5.05e-34;1!CL:0000172;5.05e-34;1!CL:0000173;5.05e-34;1!CL:0000047;9.07e-18;2!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.85e-34,1;CL:0000164,9.85e-34,1;CL:0000502,9.85e-34,1;CL:0000172,9.85e-34,1;CL:0000173,9.85e-34,1;CL:0002351,9.85e-34,1;CL:0000047,2.01e-17,8;CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;5.05e-34;1!UBERON:0005425;5.05e-34;1!UBERON:0003056;2.59e-12;3!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4!CL:0000031;8.48e-07;6 | |||
|ontology_enrichment_disease=DOID:4430!1.08e-10!1;DOID:3571!1.57e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;5.05e-34;1!DOID:169;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.85e-34,1;DOID:169,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006915!7.86e-13!3;UBERON:0002018!7.86e-13!3;UBERON:0002217!7.86e-13!3;UBERON:0007616!7.86e-13!3;UBERON:0002134!7.40e-11!1;UBERON:0005208!7.40e-11!1;UBERON:0005946!7.40e-11!1;UBERON:0005965!7.40e-11!1;UBERON:0002078!7.40e-11!1;UBERON:0000941!8.14e-11!1;UBERON:0004904!8.14e-11!1;UBERON:0002464!8.14e-11!1;UBERON:0001021!8.14e-11!1;UBERON:0001785!8.14e-11!1;UBERON:0001000!1.43e-10!1;UBERON:0005352!1.43e-10!1;UBERON:0004905!4.69e-08!5;UBERON:0000982!4.69e-08!5;UBERON:0004770!4.69e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.05e-34;1!UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0005208;5.05e-34;1!UBERON:0004145;5.05e-34;1!UBERON:0005946;5.05e-34;1!UBERON:0005965;5.05e-34;1!UBERON:0002078;5.05e-34;1!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0002081;9.07e-18;2!UBERON:0002133;9.07e-18;2!UBERON:0003978;2.59e-12;3!UBERON:0004151;2.59e-12;3!UBERON:0000946;2.59e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.58e-34,1;UBERON:0005208,2.58e-34,1;UBERON:0005946,2.58e-34,1;UBERON:0005965,2.58e-34,1;UBERON:0002078,2.58e-34,1;UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0002081,6.48e-18,2;UBERON:0002133,6.48e-18,2;UBERON:0010227,6.48e-18,2;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0003978,2.07e-12,3;UBERON:0009751,2.07e-12,3;UBERON:0004151,2.07e-12,3;UBERON:0000946,2.07e-12,3;UBERON:0002523,2.07e-12,3;UBERON:0005983,2.07e-12,3;UBERON:0004145,2.07e-12,3;UBERON:0002165,2.07e-12,3;UBERON:0002062,2.07e-12,3;UBERON:0007280,2.07e-12,3;UBERON:0001781,1.32e-09,4;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6985670017611,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6985670017611,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:93439916..93439921,- | |short_description=p@chr13:93439916..93439921,- | ||
}} | }} |
Latest revision as of 17:27, 24 July 2015
Short description: | p@chr13:93439916..93439921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:93439916..93439921, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.85e-34 | 1 |
enteroendocrine cell | 9.85e-34 | 1 |
type D enteroendocrine cell | 9.85e-34 | 1 |
somatostatin secreting cell | 9.85e-34 | 1 |
pancreatic D cell | 9.85e-34 | 1 |
progenitor cell of endocrine pancreas | 9.85e-34 | 1 |
neuronal stem cell | 2.01e-17 | 8 |
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.58e-34 | 1 |
right atrium valve | 2.58e-34 | 1 |
outflow tract of atrium | 2.58e-34 | 1 |
outflow part of right atrium | 2.58e-34 | 1 |
right cardiac atrium | 2.58e-34 | 1 |
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
cardiac atrium | 6.48e-18 | 2 |
atrioventricular valve | 6.48e-18 | 2 |
future cardiac atrium | 6.48e-18 | 2 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
valve | 2.07e-12 | 3 |
cardiac mesenchyme | 2.07e-12 | 3 |
cardiac chamber | 2.07e-12 | 3 |
cardial valve | 2.07e-12 | 3 |
tunica intima | 2.07e-12 | 3 |
heart layer | 2.07e-12 | 3 |
outflow tract | 2.07e-12 | 3 |
endocardium | 2.07e-12 | 3 |
endocardial cushion | 2.07e-12 | 3 |
presumptive endocardium | 2.07e-12 | 3 |
layer of retina | 1.32e-09 | 4 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.85e-34 | 1 |
neuroendocrine tumor | 9.49e-07 | 6 |