FFCP PHASE1:Hg19::chr14:54416688..54416713,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_CU676551_5end | |||
|cluster_id=chr14:54416688..54416713,+ | |||
|description=CAGE_peak_1_at_CU676551_5end | |||
|id=chr14:54416688..54416713,+ | |||
|ontology_enrichment_celltype=CL:0000213!6.89e-14!57;CL:0000215!6.89e-14!57;CL:0002139!8.43e-13!24;CL:0002078!7.22e-12!44;CL:0000115!2.77e-09!35;CL:0000222!2.21e-08!119;CL:0000066!5.73e-08!254;CL:0000071!5.94e-08!18;CL:0002546!5.94e-08!18;CL:0002321!3.77e-07!248;CL:0005020!5.81e-07!6;CL:0002138!5.81e-07!6;CL:0005022!5.81e-07!6;CL:0000220!8.68e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.33e-16;6!CL:0002139;8.03e-14;24!CL:0000115;1.90e-10;36!CL:0002586;1.13e-09;3!CL:0002078;1.51e-09;45!CL:0000149;2.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,8.00e-17,6;CL:0002138,8.00e-17,6;CL:0005022,8.00e-17,6;CL:0002139,4.14e-14,24;CL:0002078,7.23e-12,45;CL:0000115,8.39e-12,36;CL:0000213,7.63e-11,58;CL:0000215,7.63e-11,58;CL:0002586,9.15e-10,3;CL:0000066,6.30e-09,253;CL:0000149,2.13e-07,4 | |||
|ontology_enrichment_development_v019=CL:0005022;1.33e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;4.21e-09;14!DOID:4929;4.12e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.94e-09,14;DOID:4929,4.32e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006914!5.10e-11!25;UBERON:0000490!7.24e-10!138;UBERON:0001007!8.78e-10!155;UBERON:0001555!8.78e-10!155;UBERON:0007026!8.78e-10!155;UBERON:0000487!4.11e-09!22;UBERON:0000481!8.56e-09!347;UBERON:0003929!1.60e-08!54;UBERON:0004119!2.87e-08!169;UBERON:0000925!2.87e-08!169;UBERON:0006595!2.87e-08!169;UBERON:0001986!5.94e-08!18;UBERON:0004638!5.94e-08!18;UBERON:0004852!5.94e-08!18;UBERON:0000477!7.95e-08!286;UBERON:0004921!1.23e-07!129;UBERON:0004185!1.23e-07!129;UBERON:0000119!1.89e-07!312;UBERON:0000483!2.87e-07!309;UBERON:0004111!3.39e-07!241;UBERON:0001046!6.63e-07!19;UBERON:0003914!9.59e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.95e-12;8!UBERON:0004536;2.95e-12;8!UBERON:0006558;2.95e-12;8!UBERON:0000966;8.02e-10;5!UBERON:0005388;8.02e-10;5!UBERON:0001802;8.02e-10;5!UBERON:0001781;1.13e-09;3!UBERON:0001782;1.13e-09;3!UBERON:0002465;1.20e-09;10!UBERON:0005409;3.85e-08;22!UBERON:0000059;4.40e-08;11!UBERON:0001155;3.30e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.03e-12,8;UBERON:0004536,2.03e-12,8;UBERON:0006558,2.03e-12,8;UBERON:0002465,8.95e-10,10;UBERON:0001782,9.15e-10,3;UBERON:0005424,9.15e-10,3;UBERON:0000966,2.98e-08,6;UBERON:0005388,2.98e-08,6;UBERON:0001802,2.98e-08,6;UBERON:0000059,3.81e-08,11;UBERON:0001781,2.13e-07,4;UBERON:0001155,3.57e-07,9;UBERON:0005409,4.83e-07,25 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0.737201809504527,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0.204000691244253,0.940364164434263,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30152611318355,1.80719576192283,1.50401373190767,2.31754430337318,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0.79504962946682,0,2.42998351125316,0.56530794192401,3.77549492588915,1.92582629358047,0.208994966536811,1.8089173141853,3.5576626268671,6.02497102976406,0.402829317109147,0,1.22031028774085,0.735326160691737,2.43042584364528,1.87529429396568,0.22452937262617,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0,1.12135520028461,0,1.72667283892012,2.17847724779836,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0.494533858557114,0,0,0.673344455816265,0.125118519871964,0,0.877955241761676,0.919463387397059,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0.545492241181669,0.573609190778008,0.487894824518382,0.132529768321485,1.04574548582567,0.310983165046111,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,1.32438929824395,0.614942192715568,2.05881372358231,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,1.29149563659404,7.36268883581476,1.85194205030644,2.28304982681518,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,1.55126058909333,0,0,0.26593811658487,0,0.514414748524284,0,0,3.71742783511184,0.542621605391443,0.823240336780769,0,1.42156779497018,0,2.1100756394171,0,0.899756920638513,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.306923946576125,0,0.640695746278505,0,0,0,0,0,0.246381468041427,0,0,1.0877350463246,0,0,4.59257792658427,0.546273504020151,3.54035920390445,0.451199612907412,0.15403067420883,0,0,0,1.13733384070897,0,0.215915916102139,6.16909010761157,1.62567862526312,0,0.254876273045038,0,0,0,0,3.84675187674584,5.9042636225947,3.90454073597164,0.206082023295445,1.28197250745681,18.7296564819735,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,1.61885211824983,0,0.353437207037059,0.606547444719948,0,0,0.48763373908959,0.243713489631284,0,3.27599787379166,0.282810863907425,0,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0,0.286822704408103,2.16147890228867,0.7133421029625,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,5.5548516986286,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,3.40963376167696,0,0,0,0,0,1.44701316529778,0,0,0,0,0,0,0,0,0.898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,1.04951999995435,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.230850775511391,2.96249345202203,0,0.0897576444097721,0.108647371922008,0.31900115973192,1.19076871422421,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,4.24059214301822,1.08194319871046,2.98578579323551,0.353830258013357,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0.150323419414493,0.829505531177977,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0.387956065953678,0,1.58186518546373,0.137041924646751,0,0.189932387867636,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.576361668616424,6.87219576995494,0,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.199679000498991,0,0,0.403100834920358,0,0,1.02418136999391,0.988990300573997,0.943649613958588,0,0,0,0,0.643012593860077,0,0,0,0,0,0,0.236417121897595,0.577000469484979,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,2.35581144375351,0,0,0.1251909307065,0,0.110929051536852,0,0,0.249960815924213,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0,0,0,0.761610424337591,0,0.181848659202559,0.322231671127465,0,0,0.400027764663154,0,0,0,0.192619830407303,5.57548137574807,0.260994291965212,0.453411851024545,0,0,0.179088841081487,0.617602894321944,1.53498834705095,0,0.192914038270915,0.168942440653073,0,0.690860683462397,0.607719912354764,0,0,0,0,0,0,0.211312123358627,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46873160583479,0.918736432059601,0.0642292250964595,0,0,0.205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| |||
|short_description=p1@CU676551 | |||
}} |
Latest revision as of 21:10, 24 July 2015
Short description: | p1@CU676551 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU676551_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_CU676551_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 8.00e-17 | 6 |
endothelial cell of lymphatic vessel | 8.00e-17 | 6 |
vascular lymphangioblast | 8.00e-17 | 6 |
endothelial cell of vascular tree | 4.14e-14 | 24 |
meso-epithelial cell | 7.23e-12 | 45 |
endothelial cell | 8.39e-12 | 36 |
lining cell | 7.63e-11 | 58 |
barrier cell | 7.63e-11 | 58 |
retinal pigment epithelial cell | 9.15e-10 | 3 |
epithelial cell | 6.30e-09 | 253 |
visual pigment cell | 2.13e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.03e-12 | 8 |
lymph vasculature | 2.03e-12 | 8 |
lymphatic part of lymphoid system | 2.03e-12 | 8 |
lymphoid system | 8.95e-10 | 10 |
pigmented layer of retina | 9.15e-10 | 3 |
presumptive retinal pigmented epithelium | 9.15e-10 | 3 |
retina | 2.98e-08 | 6 |
photoreceptor array | 2.98e-08 | 6 |
posterior segment of eyeball | 2.98e-08 | 6 |
large intestine | 3.81e-08 | 11 |
layer of retina | 2.13e-07 | 4 |
colon | 3.57e-07 | 9 |
gastrointestinal system | 4.83e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.94e-09 | 14 |
tubular adenocarcinoma | 4.32e-07 | 2 |