FFCP PHASE1:Hg19::chr14:59830369..59830387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:59830369..59830387,+ | |||
|coexpression_cluster_id=C2304 | |||
|description=CAGE_peak_at_chr14:59830369..59830387,+ | |description=CAGE_peak_at_chr14:59830369..59830387,+ | ||
|id=chr14:59830369..59830387,+ | |id=chr14:59830369..59830387,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.32e-17!254;CL:0000076!3.40e-13!62;CL:0000220!2.87e-09!246;CL:0002321!3.06e-09!248 | |ontology_enrichment_celltype=CL:0000066!1.32e-17!254;CL:0000076!3.40e-13!62;CL:0000220!2.87e-09!246;CL:0002321!3.06e-09!248 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.62e-11;42!CL:0002251;3.51e-11;20!CL:0000150;2.79e-09;9!CL:0002621;3.30e-09;3!CL:0002166;6.49e-09;3!CL:0000622;9.53e-08;5!CL:0000076;9.92e-08;63!CL:0002623;1.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.28e-19,253;CL:0000076,6.31e-14,63;CL:0002076,2.08e-13,42;CL:0002251,2.82e-11,20;CL:0000223,6.08e-11,58;CL:0000150,2.97e-09,9;CL:0002621,3.33e-09,3;CL:0002166,5.24e-09,3;CL:0002623,6.19e-08,3;CL:0000622,7.52e-08,5;CL:0002321,2.74e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.54e-10!106;DOID:1749!1.26e-08!14 | |ontology_enrichment_disease=DOID:305!2.54e-10!106;DOID:1749!1.26e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.70e-17;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.05e-17,14;DOID:305,1.88e-10,106;DOID:0050687,1.66e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.30e-09;3!UBERON:0000161;2.01e-07;19!UBERON:0000166;2.01e-07;19!UBERON:0000486;2.43e-07;12!UBERON:0003729;5.03e-07;13!UBERON:0001708;9.31e-07;4!UBERON:0008895;9.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.33e-09,3;UBERON:0003729,5.18e-07,13;UBERON:0001708,7.95e-07,4;UBERON:0008895,7.95e-07,4 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,1.04142150482278,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0.24406205754817,0.367663080345869,0,0,0.22452937262617,0,0,1.89853131913626,0,0,0,0,0,0.759783069987479,0.264818361626438,0,0.354668382198357,1.12135520028461,0,0.74000264525148,0.933633106199299,0.538842688278752,0.490385709340376,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0.412210116953756,0,0,0,0,0,0.368199594569197,0.969876340912871,0,0,0,4.05847791642923,2.72746120590835,5.16248271700207,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,0.653638332277218,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0.548751427043128,1.1240175325762,5.93120937228622,3.42577247086559,0,0,0,0.115930404975077,0.939269553886573,0,0,0.761016608938393,0,0,0,0,0,2.81201501960331,4.53551746136921,2.83550194484773,2.68675568108545,4.94077695473735,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,3.36106460970222,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0.65147236858747,0,2.37585561880029,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,1.48418066444991,0,0.355123450626254,0.246381468041427,1.55776328755086,0.232420756919918,0,2.20557117333613,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,0,0.154048617114644,0,0.275673144969061,0.107420244868274,0.290033387828457,0,0.267096106940212,1.15699440752685,1.92190067365106,1.65896526242959,0.10115778085555,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,0.572499546967965,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,1.10273068709225,0,0,0,0,0.405820753925408,0,0,0.717056761020258,0.196498082026242,0.35667105148125,0,0.211107635297664,0.658589785919804,0,0,2.69421915631434,0.670302275535787,0,0.376575203107117,0.86101074534246,1.68471475667626,0.886860307073351,2.75668080248351,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0.296964680832639,1.53580351049616,0,0.281338832821026,2.89402633059555,0,0,0,0,0.251932747854276,0,0.123084805461069,0,1.25815691606258,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,1.593108275997,1.01701460117107,0,0,0,0,0,0,0,0.110579259931225,0,0,0,2.92789862985067,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,2.37191225980366,1.56531695145672,0,0,0,0,0.063186579628488,0,0,1.32930774541437,0,0.313932918407225,1.19472429772959,0,0,0.520679215005393,3.5277263069176,5.04943398166335,0.34945333648406,0,0.774050650312681,1.97341156132701,0.410577285266046,0.0969890164884194,0,0.451961481561065,2.19267079434801,0.596143835108969,0.0633107959558787,3.51992488922645,0.561111741760736,0,0,0.144090417154106,0,0,3.60136994970374,0.124252535565433,0.707082103850386,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0,0.717873024576814,0,0,0.446342914883745,0.134366944973453,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0,0,0.394028536495991,0.0524545881349981,1.05600336519407,0,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0.113312091520126,0.58620893471233,0,0,0.39669780522807,0,0.704815022316672,0,0.157204305099666,0,0,0,0.121792598380896,13.4051664131738,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0,0.37494122388632,0,0,1.17632909849086,0,0.28984205722165,0.298509605773748,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0.302461847526478,1.2434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| ||
|short_description=p@chr14:59830369..59830387,+ | |short_description=p@chr14:59830369..59830387,+ | ||
}} | }} |
Latest revision as of 21:28, 24 July 2015
Short description: | p@chr14:59830369..59830387, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:59830369..59830387, + |
Coexpression cluster: | C2304_malignant_mesothelioma_Keratinocyte_Mesenchymal_oral_epidermoid_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.28e-19 | 253 |
squamous epithelial cell | 6.31e-14 | 63 |
endo-epithelial cell | 2.08e-13 | 42 |
epithelial cell of alimentary canal | 2.82e-11 | 20 |
endodermal cell | 6.08e-11 | 58 |
glandular epithelial cell | 2.97e-09 | 9 |
gingival epithelial cell | 3.33e-09 | 3 |
epithelial cell of Malassez | 5.24e-09 | 3 |
acinar cell of salivary gland | 6.19e-08 | 3 |
acinar cell | 7.52e-08 | 5 |
embryonic cell | 2.74e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.33e-09 | 3 |
mouth mucosa | 5.18e-07 | 13 |
jaw skeleton | 7.95e-07 | 4 |
splanchnocranium | 7.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.05e-17 | 14 |
carcinoma | 1.88e-10 | 106 |
cell type cancer | 1.66e-07 | 143 |