FFCP PHASE1:Hg19::chr15:89381951..89381962,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:89381951..89381962,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_at_chr15:89381951..89381962,+ | |||
|id=chr15:89381951..89381962,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.15e-23!9;CL:0000447!2.15e-23!9;CL:0000667!1.49e-18!6;CL:0000058!1.49e-18!6;CL:0000138!1.49e-18!6;CL:0002620!5.24e-16!23;CL:0000327!1.18e-14!14;CL:0000057!2.50e-10!75;CL:0000055!5.74e-10!180;CL:0000499!4.21e-09!27;CL:0000214!8.73e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;6.99e-64;9!CL:0000447;6.99e-64;9!CL:0000138;1.02e-49;6!CL:0000327;3.52e-38;15!CL:0000499;3.15e-20;28!CL:0000214;1.32e-16;3!CL:0000151;1.14e-12;36!CL:0002556;1.17e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,6.39e-64,9;CL:0000447,6.39e-64,9;CL:0000058,1.08e-49,6;CL:0000138,1.08e-49,6;CL:0000327,3.34e-38,15;CL:0000499,3.06e-20,28;CL:0000214,1.17e-16,3;CL:0000151,1.28e-15,36;CL:0002556,1.13e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;6.42e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,6.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.03e-12!40;UBERON:0002199!1.33e-10!45;UBERON:0002416!1.33e-10!45;UBERON:0003127!1.35e-09!2;UBERON:0004457!2.25e-08!12;UBERON:0000042!2.25e-08!12;UBERON:0003102!2.10e-07!95;UBERON:0006915!8.73e-07!3;UBERON:0002018!8.73e-07!3;UBERON:0002217!8.73e-07!3;UBERON:0007616!8.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.32e-16;3!UBERON:0007616;1.32e-16;3!UBERON:0002217;1.32e-16;3!UBERON:0002018;1.32e-16;3!UBERON:0004457;2.81e-12;9!UBERON:0000042;2.81e-12;9!UBERON:0001758;1.17e-08;6!UBERON:0003672;1.17e-08;6!UBERON:0003129;1.52e-07;7!UBERON:0003127;4.29e-07;2!UBERON:0004905;8.72e-07;8!UBERON:0000982;8.72e-07;8!UBERON:0004770;8.72e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.17e-16,3;UBERON:0007616,1.17e-16,3;UBERON:0002217,1.17e-16,3;UBERON:0002018,1.17e-16,3;UBERON:0004457,2.61e-09,12;UBERON:0000042,2.61e-09,12;UBERON:0001758,1.13e-08,6;UBERON:0003672,1.13e-08,6;UBERON:0003129,1.47e-07,7;UBERON:0003127,3.28e-07,2;UBERON:0004905,8.35e-07,8;UBERON:0000982,8.35e-07,8;UBERON:0004770,8.35e-07,8 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,6.01605492763067,3.18662341713812,7.15757352345989,17.0322204605923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,1.83892677479412,1.35214253015937,0,0.89694817844431,0.213557388818567,0,0,0,6.1833729610951,0.930584281657949,0.337552664482532,1.94874010322397,0,0,0.323292113637624,1.42003837006646,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,1.07423381301644,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01104507065562,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.639701945702943,0,0,0,0,0,0,0,0,0,0.717222053926764,1.99596213927608,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr15:89381951..89381962,+ | |||
}} |
Latest revision as of 05:15, 25 July 2015
Short description: | p@chr15:89381951..89381962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89381951..89381962, + |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 6.39e-64 | 9 |
carbohydrate secreting cell | 6.39e-64 | 9 |
chondroblast | 1.08e-49 | 6 |
chondrocyte | 1.08e-49 | 6 |
extracellular matrix secreting cell | 3.34e-38 | 15 |
stromal cell | 3.06e-20 | 28 |
synovial cell | 1.17e-16 | 3 |
secretory cell | 1.28e-15 | 36 |
fibroblast of periodontium | 1.13e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.17e-16 | 3 |
layer of synovial tissue | 1.17e-16 | 3 |
synovial joint | 1.17e-16 | 3 |
synovial membrane of synovial joint | 1.17e-16 | 3 |
cavity lining | 2.61e-09 | 12 |
serous membrane | 2.61e-09 | 12 |
periodontium | 1.13e-08 | 6 |
dentition | 1.13e-08 | 6 |
skull | 1.47e-07 | 7 |
open tracheal system trachea | 3.28e-07 | 2 |
articulation | 8.35e-07 | 8 |
skeletal joint | 8.35e-07 | 8 |
articular system | 8.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 6.06e-13 | 1 |