FFCP PHASE1:Hg19::chr15:94613786..94613790,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=258bp_to_ENST00000555772,ENST00000556447_5end | |association_with_transcript=258bp_to_ENST00000555772,ENST00000556447_5end | ||
|cluster_id=chr15:94613786..94613790,- | |||
|description=CAGE_peak_3_at_ENST00000555772_5end,CAGE_peak_3_at_ENST00000556447_5end | |description=CAGE_peak_3_at_ENST00000555772_5end,CAGE_peak_3_at_ENST00000556447_5end | ||
|id=chr15:94613786..94613790,- | |id=chr15:94613786..94613790,- | ||
|ontology_enrichment_celltype=CL:0000095!2.40e-07!17;CL:0000123!2.40e-07!17;CL:0002319!3.32e-07!25 | |ontology_enrichment_celltype=CL:0000095!2.40e-07!17;CL:0000123!2.40e-07!17;CL:0002319!3.32e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.53e-16;1!CL:0002372;1.53e-16;1!CL:0002319;2.23e-09;25!CL:0000047;6.17e-09;2!CL:0000123;6.17e-09;2!CL:0000242;6.17e-09;2!CL:0000095;7.11e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.21e-16,1;CL:0002372,1.21e-16,1;CL:0002319,2.25e-09,25;CL:0000242,4.70e-09,2;CL:0000095,7.11e-08,17;CL:0000123,7.11e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.94e-39!57;UBERON:0005068!7.94e-39!57;UBERON:0006241!7.94e-39!57;UBERON:0007135!7.94e-39!57;UBERON:0000073!2.06e-36!94;UBERON:0001016!2.06e-36!94;UBERON:0001017!2.52e-36!82;UBERON:0005743!9.42e-36!86;UBERON:0000955!7.84e-34!69;UBERON:0006238!7.84e-34!69;UBERON:0002616!2.05e-32!59;UBERON:0002780!1.85e-30!41;UBERON:0001890!1.85e-30!41;UBERON:0006240!1.85e-30!41;UBERON:0003080!1.49e-29!42;UBERON:0002020!6.07e-27!34;UBERON:0003528!6.07e-27!34;UBERON:0001893!7.68e-27!34;UBERON:0002791!3.17e-25!33;UBERON:0002346!8.36e-25!90;UBERON:0001869!1.22e-23!32;UBERON:0003075!1.56e-23!86;UBERON:0007284!1.56e-23!86;UBERON:0000924!1.02e-19!173;UBERON:0006601!1.02e-19!173;UBERON:0003056!2.19e-19!61;UBERON:0007023!2.44e-19!115;UBERON:0004121!1.41e-18!169;UBERON:0000956!8.44e-18!25;UBERON:0000203!8.44e-18!25;UBERON:0000033!3.26e-16!123;UBERON:0002619!8.33e-16!22;UBERON:0000153!5.84e-15!129;UBERON:0007811!5.84e-15!129;UBERON:0001950!9.01e-13!20;UBERON:0002308!6.64e-11!9;UBERON:0000125!6.64e-11!9;UBERON:0000475!6.96e-11!365;UBERON:0003076!3.12e-10!15;UBERON:0003057!3.12e-10!15;UBERON:0002298!9.43e-10!8;UBERON:0002420!8.65e-08!9;UBERON:0007245!8.65e-08!9;UBERON:0010009!8.65e-08!9;UBERON:0010011!8.65e-08!9;UBERON:0000454!8.65e-08!9;UBERON:0009663!1.75e-07!7;UBERON:0000988!2.00e-07!3;UBERON:0004732!2.14e-07!13;UBERON:0002240!2.18e-07!3;UBERON:0006331!2.42e-07!3;UBERON:0000025!2.61e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0003714;6.17e-09;2!UBERON:0001875;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2!UBERON:0006514;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.04e-16,1;UBERON:0001785,1.04e-16,1;UBERON:0002464,1.04e-16,1;UBERON:0004904,1.04e-16,1;UBERON:0001021,1.04e-16,1;UBERON:0003902,1.04e-16,1;UBERON:0005425,1.04e-16,1;UBERON:0003714,5.08e-09,2;UBERON:0005162,5.08e-09,2;UBERON:0000122,5.08e-09,2;UBERON:0001875,7.49e-09,2;UBERON:0006514,7.49e-09,2;UBERON:0001016,1.21e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.68205903612839,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,1.27047312111232,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,1.1249555075237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,3.75635766871975,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.554645257684261,0.745156835296601,0,0,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0,0.252071696221718,0.414943514785307,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.405225507710368,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.883606528698812,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,2.3196288626764,0,0,0.198950775161368,0,0,0,4.22695961986686,0,0,0,0,0,0.196308467114945,0.891139200981258,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.244209805832924,0,0,0,0,0.733448665097199,0.406896178315738,0,0,0 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| ||
|short_description=p3@ENST00000555772,p3@ENST00000556447 | |short_description=p3@ENST00000555772,p3@ENST00000556447 | ||
}} | }} |
Latest revision as of 05:49, 25 July 2015
Short description: | p3@ENST00000555772, p3@ENST00000556447 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000555772_5end, CAGE_peak_3_at_ENST00000556447_5end |
Coexpression cluster: | NA |
Association with transcript: | 258bp_to_ENST00000555772, ENST00000556447_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.21e-16 | 1 |
myotube | 1.21e-16 | 1 |
neural cell | 2.25e-09 | 25 |
Merkel cell | 4.70e-09 | 2 |
neuron associated cell | 7.11e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 7.11e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.04e-16 | 1 |
cranial nerve | 1.04e-16 | 1 |
nerve trunk | 1.04e-16 | 1 |
nerve connecting eye with brain | 1.04e-16 | 1 |
nerve | 1.04e-16 | 1 |
retinal neural layer | 1.04e-16 | 1 |
presumptive neural retina | 1.04e-16 | 1 |
neural tissue | 5.08e-09 | 2 |
multi cell component structure | 5.08e-09 | 2 |
neuron projection bundle | 5.08e-09 | 2 |
globus pallidus | 7.49e-09 | 2 |
pallidum | 7.49e-09 | 2 |
nervous system | 1.21e-07 | 89 |