FFCP PHASE1:Hg19::chr16:12238400..12238448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:12238400..12238448,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr16:12238400..12238448,+ | |description=CAGE_peak_at_chr16:12238400..12238448,+ | ||
|id=chr16:12238400..12238448,+ | |id=chr16:12238400..12238448,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.76e-08!3;CL:1000615!2.76e-08!3;CL:0002306!2.76e-08!3;CL:0000817!6.72e-08!3 | |ontology_enrichment_celltype=CL:0000239!2.76e-08!3;CL:1000615!2.76e-08!3;CL:0002306!2.76e-08!3;CL:0000817!6.72e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.09e-10;3!CL:1000615;1.09e-10;3!CL:0002306;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.90e-11,3;CL:1000615,9.90e-11,3;CL:0002306,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.94e-12;10!UBERON:0005564;1.94e-12;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;5.15e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.36e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0006853!2.76e-08!3;UBERON:0007685!2.76e-08!3;UBERON:0004134!2.76e-08!3;UBERON:0002771!8.58e-08!3;UBERON:0000473!6.23e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.75e-15;8!UBERON:0003135;2.13e-11;11!UBERON:0006853;1.09e-10;3!UBERON:0007685;1.09e-10;3!UBERON:0004134;1.09e-10;3!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0006853,9.90e-11,3;UBERON:0007685,9.90e-11,3;UBERON:0004134,9.90e-11,3;UBERON:0003343,2.43e-08,4;UBERON:0004785,2.43e-08,4 | |||
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|short_description=p@chr16:12238400..12238448,+ | |short_description=p@chr16:12238400..12238448,+ | ||
}} | }} |
Latest revision as of 06:18, 25 July 2015
Short description: | p@chr16:12238400..12238448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:12238400..12238448, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.90e-11 | 3 |
kidney cortex tubule cell | 9.90e-11 | 3 |
epithelial cell of proximal tubule | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
renal cortex tubule | 9.90e-11 | 3 |
region of nephron tubule | 9.90e-11 | 3 |
proximal tubule | 9.90e-11 | 3 |
mucosa of oral region | 2.43e-08 | 4 |
respiratory system mucosa | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.36e-09 | 14 |