FFCP PHASE1:Hg19::chr16:14396183..14396193,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:14396183..14396193,+ | |||
|coexpression_cluster_id=C3535 | |||
|description=CAGE_peak_at_chr16:14396183..14396193,+ | |description=CAGE_peak_at_chr16:14396183..14396193,+ | ||
|id=chr16:14396183..14396193,+ | |id=chr16:14396183..14396193,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.52e-18;5!CL:0000349;5.51e-18;19!CL:0002541;1.31e-17;3!CL:0000136;1.99e-10;13!CL:0000346;2.94e-08;3!CL:1000428;2.94e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.23e-18,5;CL:0000349,6.86e-18,19;CL:0002541,1.28e-17,3;CL:0000136,6.80e-09,15;CL:0000346,2.04e-08,3;CL:1000428,2.04e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.89e-07,1;DOID:630,7.39e-07,1;DOID:0050177,7.39e-07,1;DOID:0050427,7.39e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.06e-11!14;UBERON:0000158!5.06e-11!14;UBERON:0001737!1.39e-07!9;UBERON:0000305!6.00e-07!7;UBERON:0000478!8.13e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.14e-27;10!UBERON:0000158;5.14e-27;10!UBERON:0003124;1.31e-17;3!UBERON:0000920;1.31e-17;3!UBERON:0000478;1.54e-17;24!UBERON:0000305;2.76e-13;7!UBERON:0000412;2.94e-08;3!UBERON:0001992;2.94e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.83e-31,14;UBERON:0000158,6.83e-31,14;UBERON:0003124,9.61e-20,7;UBERON:0000920,1.28e-17,3;UBERON:0000478,2.22e-17,24;UBERON:0000305,3.62e-13,7;UBERON:0004871,1.55e-11,8;UBERON:0004923,1.76e-11,66;UBERON:0000412,2.04e-08,3;UBERON:0001992,2.04e-08,3;UBERON:0005418,6.99e-07,1;UBERON:0001389,6.99e-07,1;UBERON:0000026,6.99e-07,1;UBERON:0008784,6.99e-07,1;UBERON:0006058,6.99e-07,1;UBERON:0003663,6.99e-07,1;UBERON:0004256,6.99e-07,1;UBERON:0004708,6.99e-07,1;UBERON:0002101,6.99e-07,1;UBERON:0004709,6.99e-07,1;UBERON:0002529,6.99e-07,1;UBERON:0010538,6.99e-07,1;UBERON:0003661,6.99e-07,1;UBERON:0010890,6.99e-07,1;UBERON:0002471,6.99e-07,1;UBERON:0001383,6.99e-07,1;UBERON:0004357,6.99e-07,1;UBERON:0004347,6.99e-07,1;UBERON:0005420,6.99e-07,1;UBERON:0005732,6.99e-07,1;UBERON:0010758,6.99e-07,1;UBERON:0010707,6.99e-07,1;UBERON:0000978,6.99e-07,1;UBERON:0002103,6.99e-07,1;UBERON:0001665,6.99e-07,1;UBERON:0003823,6.99e-07,1;UBERON:0000154,6.99e-07,1;UBERON:0010709,6.99e-07,1;UBERON:0005733,6.99e-07,1;UBERON:0005730,6.99e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0.916960868975415,0.164201178899891,0.314843125254717,0,0,0,0,0.30120591877825,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0,0,0,0.0654895377488563,0,1.11235332835329,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.358779271377724,1.2813443329114,0,0.300091096084402,0.309157587715317,1.28820270022815,1.11670113798954,0.506328996723799,0.487185025805993,0.252433774244115,0.460249493211497,0,0.710019185033229,0.201504196455281,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0.482022059766964,1.21323370005633,0.871517776369625,0.237270619111097,0.674156540800822,1.17732879075208,0.769494313892781,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.630809660135739,0.234282829985426,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,3.03127571446259,0,0.907170879989041,0,0.767309866440312,0.841980283299221,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.9273691048295,0.457847324091717,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0.165284915360978,0.192190067365106,0.382838137483752,0.809262246844399,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0.0962221127255121,1.34060455107157,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,4.29740072527842,3.8605408508243,5.22173193568695,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,2.89999830173917,0,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0.897576444097721,0.325942115766024,4.46601623624687,1.28236630762607,3.73124343213044,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.587954384486266,0.522355239482415,0.17472666824203,2.23581842213102,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0.135904206073614,0.313808538937,0.815985741090574,0.288950589901519,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.26961417541674,0.295282444544246,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0,0.395223263795889,0,0,2.1760712134779,2.0055191521816,2.45076461410769,1.31149052283922,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0.770479321629213,0.214441591374926,0.260994291965212,0.906823702049089,0,0.97894681802587,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,0.192914038270915,0.675769762612291,3.8436227788192,0.345430341731199,0,0.138258436151731,0.584580926518165,0.132864840313363,0,0,1.2288645437686,0,0.19998739585493,0,0.344429959321631,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.705351887381368,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0.397832444232549,0.0752103283492573,0,0.781514011233092,0.523813388962845,0.327543835020193,0.591424344868181,0.202612753855184,0.781078098613847,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,1.06442844195167,0.115233987555779,0.514464028312255,0,0.197318320688547,0.118193840883968,0,0.235479278551542,0,0,0,0.215927591218621,0.47775168788705,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0,2.48165108531456,0,0,0,0,1.94228651156368,2.97722139883116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49911733887393,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0.897054900644907,0.0636471582781649,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,1.9234109538194 | |phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0.916960868975415,0.164201178899891,0.314843125254717,0,0,0,0,0.30120591877825,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0,0,0,0.0654895377488563,0,1.11235332835329,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.358779271377724,1.2813443329114,0,0.300091096084402,0.309157587715317,1.28820270022815,1.11670113798954,0.506328996723799,0.487185025805993,0.252433774244115,0.460249493211497,0,0.710019185033229,0.201504196455281,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0.482022059766964,1.21323370005633,0.871517776369625,0.237270619111097,0.674156540800822,1.17732879075208,0.769494313892781,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.630809660135739,0.234282829985426,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,3.03127571446259,0,0.907170879989041,0,0.767309866440312,0.841980283299221,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.9273691048295,0.457847324091717,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0.165284915360978,0.192190067365106,0.382838137483752,0.809262246844399,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0.0962221127255121,1.34060455107157,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,4.29740072527842,3.8605408508243,5.22173193568695,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,2.89999830173917,0,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0.897576444097721,0.325942115766024,4.46601623624687,1.28236630762607,3.73124343213044,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.587954384486266,0.522355239482415,0.17472666824203,2.23581842213102,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0.135904206073614,0.313808538937,0.815985741090574,0.288950589901519,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.26961417541674,0.295282444544246,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0,0.395223263795889,0,0,2.1760712134779,2.0055191521816,2.45076461410769,1.31149052283922,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0.770479321629213,0.214441591374926,0.260994291965212,0.906823702049089,0,0.97894681802587,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,0.192914038270915,0.675769762612291,3.8436227788192,0.345430341731199,0,0.138258436151731,0.584580926518165,0.132864840313363,0,0,1.2288645437686,0,0.19998739585493,0,0.344429959321631,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.705351887381368,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0.397832444232549,0.0752103283492573,0,0.781514011233092,0.523813388962845,0.327543835020193,0.591424344868181,0.202612753855184,0.781078098613847,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,1.06442844195167,0.115233987555779,0.514464028312255,0,0.197318320688547,0.118193840883968,0,0.235479278551542,0,0,0,0.215927591218621,0.47775168788705,0,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0,2.48165108531456,0,0,0,0,1.94228651156368,2.97722139883116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49911733887393,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0.897054900644907,0.0636471582781649,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,1.9234109538194 | ||
|short_description=p@chr16:14396183..14396193,+ | |short_description=p@chr16:14396183..14396193,+ | ||
}} | }} |
Latest revision as of 06:26, 25 July 2015
Short description: | p@chr16:14396183..14396193, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:14396183..14396193, + |
Coexpression cluster: | C3535_amniotic_skeletal_chorionic_epithelioid_myeloma_Placental_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.23e-18 | 5 |
extraembryonic cell | 6.86e-18 | 19 |
chorionic membrane mesenchymal stem cell | 1.28e-17 | 3 |
fat cell | 6.80e-09 | 15 |
hair follicle dermal papilla cell | 2.04e-08 | 3 |
stem cell of epidermis | 2.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.89e-07 | 1 |
genetic disease | 7.39e-07 | 1 |
monogenic disease | 7.39e-07 | 1 |
xeroderma pigmentosum | 7.39e-07 | 1 |