FFCP PHASE1:Hg19::chr17:26971102..26971126,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:26971102..26971126,-
|short_description=p@chr17:26971102..26971126,-
|description=CAGE_peak_at_chr17:26971102..26971126,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:26971102..26971126,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr17:26971102..26971126,- | |||
|id=chr17:26971102..26971126,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;6.62e-26;5!CL:0000775;3.68e-23;3!CL:0000094;3.00e-19;8!CL:0002591;1.12e-17;1!CL:0000990;1.62e-17;8!CL:0000451;1.87e-14;10!CL:0000081;3.45e-14;11!CL:0000097;4.69e-14;5!CL:0000771;1.64e-09;2!CL:0000163;3.18e-08;9!CL:0002567;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.62e-26,5;CL:0001029,6.62e-26,5;CL:0000775,3.68e-23,3;CL:0000094,2.91e-19,8;CL:0002591,1.44e-17,1;CL:0000990,1.62e-17,8;CL:0000451,1.87e-14,10;CL:0000081,3.37e-14,11;CL:0000766,5.33e-14,72;CL:0000097,5.72e-14,5;CL:0002028,5.72e-14,5;CL:0000771,1.57e-09,2;CL:0000763,3.50e-09,108;CL:0000049,3.50e-09,108;CL:0000163,3.55e-08,9;CL:0000738,3.59e-07,136;CL:0002567,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.64e-09;2!UBERON:0002012;1.64e-09;2!UBERON:0008886;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0,0,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0.336985893439485,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,14.6046327144608,9.75126528875897,3.32394901297163,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.490385709340376,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.352193736052904,1.03664057770386,0.864719720501769,1.13618190083742,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0.600686115687835,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,2.99161459204025,2.07207756718018,0.36807447515742,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0.714695326373367,0,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0.684704037099577,0.156679895773023,0,0.50787533340481,0,0,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,0.835218521685727,0,0,0.33307196799782,0,0.561421621224659,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0.174919999992391,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0,0,0.23056390438806,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.370691816839509,0,0.202203398942031,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.246346371159628,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.39961921916426,0,0.343609788497747,0.343189995723929,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.169346664131569,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0.28984205722165,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0.260994291965212,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0.337884881306145,0.76872455576384,0,0,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.213383459388282,0.344429959321631,0,0.184105950251841,0,0,0,0.215649622793364,0.157265941855896,0,0.169732529954025,0,0.123935764259002,0,0.636008701306837,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.327543835020193,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0.131545547125698,0.472775363535873,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0.955538938977433,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0,0,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0.336985893439485,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,14.6046327144608,9.75126528875897,3.32394901297163,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.490385709340376,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.352193736052904,1.03664057770386,0.864719720501769,1.13618190083742,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0.600686115687835,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,2.99161459204025,2.07207756718018,0.36807447515742,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0.714695326373367,0,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0.684704037099577,0.156679895773023,0,0.50787533340481,0,0,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,0.835218521685727,0,0,0.33307196799782,0,0.561421621224659,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0.174919999992391,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0,0,0.23056390438806,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.370691816839509,0,0.202203398942031,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.246346371159628,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.39961921916426,0,0.343609788497747,0.343189995723929,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.169346664131569,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0.28984205722165,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0.260994291965212,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0.337884881306145,0.76872455576384,0,0,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0,0,0.19998739585493,0.213383459388282,0.344429959321631,0,0.184105950251841,0,0,0,0.215649622793364,0.157265941855896,0,0.169732529954025,0,0.123935764259002,0,0.636008701306837,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.327543835020193,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0.131545547125698,0.472775363535873,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0,0,0.955538938977433,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr17:26971102..26971126,- | |||
}} | }} |
Latest revision as of 15:01, 25 July 2015
Short description: | p@chr17:26971102..26971126, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:26971102..26971126, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.62e-26 | 5 |
common dendritic progenitor | 6.62e-26 | 5 |
neutrophil | 3.68e-23 | 3 |
granulocyte | 2.91e-19 | 8 |
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
conventional dendritic cell | 1.62e-17 | 8 |
dendritic cell | 1.87e-14 | 10 |
blood cell | 3.37e-14 | 11 |
myeloid leukocyte | 5.33e-14 | 72 |
mast cell | 5.72e-14 | 5 |
basophil mast progenitor cell | 5.72e-14 | 5 |
eosinophil | 1.57e-09 | 2 |
myeloid cell | 3.50e-09 | 108 |
common myeloid progenitor | 3.50e-09 | 108 |
endocrine cell | 3.55e-08 | 9 |
leukocyte | 3.59e-07 | 136 |
light melanocyte | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |