FFCP PHASE1:Hg19::chr17:38125787..38125800,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38125787..38125800,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_at_chr17:38125787..38125800,+ | |description=CAGE_peak_at_chr17:38125787..38125800,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002619!8.55e-28!3;CL:0000235!1.14e-08!10 | |ontology_enrichment_celltype=CL:0002619!8.55e-28!3;CL:0000235!1.14e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002619;5.41e-85;3!CL:0000235;8.63e-43;6!CL:0000115;1.95e-07;36!CL:0000473;3.99e-07;39!CL:0000234;3.99e-07;39 | |ontology_enrichment_celltype_v019=CL:0002619;5.41e-85;3!CL:0000235;8.63e-43;6!CL:0000115;1.95e-07;36!CL:0000473;3.99e-07;39!CL:0000234;3.99e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,4.06e-85,3;CL:0000235,8.63e-43,6;CL:0002194,3.02e-17,59;CL:0000576,3.02e-17,59;CL:0000040,3.02e-17,59;CL:0000559,3.02e-17,59;CL:0002009,1.06e-16,61;CL:0000839,1.77e-15,66;CL:0000557,2.96e-15,67;CL:0000766,3.14e-14,72;CL:0000763,1.33e-09,108;CL:0000049,1.33e-09,108;CL:0002087,4.92e-09,115;CL:0002031,1.15e-08,120;CL:0000115,7.96e-08,36;CL:0000738,1.14e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.16e-29;1 | |ontology_enrichment_development_v019=UBERON:0010115;3.16e-29;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002363!2.84e-10!1;UBERON:0007647!2.84e-10!1;UBERON:0010115!2.84e-10!1;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0002370!1.73e-09!4;UBERON:0005058!1.73e-09!4;UBERON:0009113!1.73e-09!4;UBERON:0003295!1.73e-09!4;UBERON:0005562!1.73e-09!4 | |ontology_enrichment_uberon=UBERON:0002363!2.84e-10!1;UBERON:0007647!2.84e-10!1;UBERON:0010115!2.84e-10!1;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0002370!1.73e-09!4;UBERON:0005058!1.73e-09!4;UBERON:0009113!1.73e-09!4;UBERON:0003295!1.73e-09!4;UBERON:0005562!1.73e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.16e-29;1!UBERON:0002360;2.37e-15;2!UBERON:0000094;2.37e-15;2!UBERON:0010743;2.37e-15;2 | |ontology_enrichment_uberon_v019=UBERON:0002363;3.16e-29;1!UBERON:0002360;2.37e-15;2!UBERON:0000094;2.37e-15;2!UBERON:0010743;2.37e-15;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,4.20e-29,1;UBERON:0007645,4.20e-29,1;UBERON:0007647,4.20e-29,1;UBERON:0010115,4.20e-29,1;UBERON:0002360,2.74e-15,2;UBERON:0000094,2.74e-15,2;UBERON:0010743,2.74e-15,2;UBERON:0002371,1.67e-13,76;UBERON:0001474,1.51e-12,82;UBERON:0004765,1.83e-11,90;UBERON:0002405,4.18e-11,93;UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98;UBERON:0001434,2.38e-10,100;UBERON:0002193,1.33e-09,108 | |||
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|short_description=p@chr17:38125787..38125800,+ | |short_description=p@chr17:38125787..38125800,+ | ||
}} | }} |
Latest revision as of 16:16, 25 July 2015
Short description: | p@chr17:38125787..38125800, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38125787..38125800, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 4.06e-85 | 3 |
macrophage | 8.63e-43 | 6 |
monopoietic cell | 3.02e-17 | 59 |
monocyte | 3.02e-17 | 59 |
monoblast | 3.02e-17 | 59 |
promonocyte | 3.02e-17 | 59 |
macrophage dendritic cell progenitor | 1.06e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-15 | 66 |
granulocyte monocyte progenitor cell | 2.96e-15 | 67 |
myeloid leukocyte | 3.14e-14 | 72 |
myeloid cell | 1.33e-09 | 108 |
common myeloid progenitor | 1.33e-09 | 108 |
nongranular leukocyte | 4.92e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
endothelial cell | 7.96e-08 | 36 |
leukocyte | 1.14e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
dura mater | 4.20e-29 | 1 |
future meninx | 4.20e-29 | 1 |
ectomeninx | 4.20e-29 | 1 |
future dura mater | 4.20e-29 | 1 |
meninx | 2.74e-15 | 2 |
membrane organ | 2.74e-15 | 2 |
meningeal cluster | 2.74e-15 | 2 |
bone marrow | 1.67e-13 | 76 |
bone element | 1.51e-12 | 82 |
skeletal element | 1.83e-11 | 90 |
immune system | 4.18e-11 | 93 |
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |
skeletal system | 2.38e-10 | 100 |
hemolymphoid system | 1.33e-09 | 108 |