FFCP PHASE1:Hg19::chr17:38976601..38976615,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38976601..38976615,-
|short_description=p@chr17:38976601..38976615,-
|description=CAGE_peak_at_chr17:38976601..38976615,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38976601..38976615,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_at_chr17:38976601..38976615,- | |||
|id=chr17:38976601..38976615,- | |||
|ontology_enrichment_celltype=CL:0000622!2.49e-18!5;CL:0002623!1.26e-17!3;CL:0002150!4.20e-17!3;CL:0000861!4.20e-17!3;CL:0000150!2.42e-15!9;CL:0000154!2.69e-15!6 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.38e-40;5!CL:0000154;8.88e-34;6!CL:0002623;1.17e-30;3!CL:0000150;8.37e-23;9!CL:0001014;2.59e-12;2!CL:0001016;2.59e-12;2!CL:0000317;2.90e-12;2!CL:1000448;2.90e-12;2!CL:0002308;2.90e-12;2!CL:0002140;2.90e-12;2!CL:0000151;5.84e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.23e-40,5;CL:0000154,8.40e-34,6;CL:0002623,1.09e-30,3;CL:0000150,8.06e-23,9;CL:0001014,2.59e-12,2;CL:0001016,2.59e-12,2;CL:0000317,2.90e-12,2;CL:1000448,2.90e-12,2;CL:0002308,2.90e-12,2;CL:0002140,2.90e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.34e-23;1!UBERON:0008814;3.43e-12;2!UBERON:0010056;3.43e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!3.86e-15!6;UBERON:0003293!3.86e-15!6;UBERON:0003294!3.86e-15!6;UBERON:0010047!3.86e-15!6;UBERON:0000167!3.86e-15!6;UBERON:0003408!1.79e-13!10;UBERON:0000078!1.33e-10!18;UBERON:0000166!5.36e-09!21;UBERON:0001723!2.31e-08!3;UBERON:0001033!2.31e-08!3;UBERON:0010056!2.31e-08!3;UBERON:0003135!6.54e-08!11;UBERON:0007029!4.58e-07!1;UBERON:0000989!4.85e-07!1;UBERON:0008811!4.85e-07!1;UBERON:0006258!4.85e-07!1;UBERON:0005876!4.85e-07!1;UBERON:0004874!4.85e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.49e-23;1!UBERON:0000989;2.34e-23;1!UBERON:0008811;2.34e-23;1!UBERON:0001044;6.97e-16;6!UBERON:0003293;6.97e-16;6!UBERON:0003294;6.97e-16;6!UBERON:0010047;6.97e-16;6!UBERON:0003408;6.97e-16;6!UBERON:0000167;6.97e-16;6!UBERON:0002419;2.90e-12;2!UBERON:0007771;2.90e-12;2!UBERON:0003297;2.90e-12;2!UBERON:0001821;2.90e-12;2!UBERON:0003487;2.90e-12;2!UBERON:0001820;2.90e-12;2!UBERON:0001723;1.46e-08;3!UBERON:0001033;1.46e-08;3!UBERON:0000165;9.00e-08;28!UBERON:0001041;2.40e-07;14!UBERON:0002365;2.63e-07;31!UBERON:0002330;2.63e-07;31!UBERON:0000014;7.07e-07;4!UBERON:0001003;7.75e-07;15!UBERON:0007376;7.75e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.67e-23,1;UBERON:0000989,2.10e-23,1;UBERON:0008811,2.10e-23,1;UBERON:0006258,2.10e-23,1;UBERON:0005876,2.10e-23,1;UBERON:0004874,2.10e-23,1;UBERON:0001044,6.71e-16,6;UBERON:0003293,6.71e-16,6;UBERON:0003294,6.71e-16,6;UBERON:0010047,6.71e-16,6;UBERON:0000167,6.71e-16,6;UBERON:0002419,2.90e-12,2;UBERON:0007771,2.90e-12,2;UBERON:0003297,2.90e-12,2;UBERON:0001821,2.90e-12,2;UBERON:0003487,2.90e-12,2;UBERON:0001820,2.90e-12,2;UBERON:0005089,2.90e-12,2;UBERON:0005088,2.90e-12,2;UBERON:0003408,6.20e-10,10;UBERON:0000166,9.69e-10,22;UBERON:0001723,1.40e-08,3;UBERON:0001033,1.40e-08,3;UBERON:0010056,1.40e-08,3;UBERON:0000165,1.56e-07,29;UBERON:0000930,1.56e-07,29;UBERON:0002365,4.30e-07,31;UBERON:0002330,4.30e-07,31;UBERON:0000014,7.27e-07,4;UBERON:0001003,7.86e-07,15;UBERON:0007376,7.86e-07,15;UBERON:0007383,7.86e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41349223681575,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,1.00692952185506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870806981601766,0.65780385377567,0.574808199372465,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,6.45074531906083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,14.1696335987978,25.5766074871214,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,14.085618798715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,1.30630048738177,0.684466602170562,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41349223681575,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,1.00692952185506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870806981601766,0.65780385377567,0.574808199372465,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,6.45074531906083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,14.1696335987978,25.5766074871214,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,14.085618798715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,1.30630048738177,0.684466602170562,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:38976601..38976615,- | |||
}} | }} |
Latest revision as of 16:36, 25 July 2015
Short description: | p@chr17:38976601..38976615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38976601..38976615, - |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.23e-40 | 5 |
protein secreting cell | 8.40e-34 | 6 |
acinar cell of salivary gland | 1.09e-30 | 3 |
glandular epithelial cell | 8.06e-23 | 9 |
CD1a-positive Langerhans cell | 2.59e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.59e-12 | 2 |
sebum secreting cell | 2.90e-12 | 2 |
epithelial cell of sweat gland | 2.90e-12 | 2 |
epithelial cell of skin gland | 2.90e-12 | 2 |
acinar cell of sebaceous gland | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 1.67e-23 | 1 |
penis | 2.10e-23 | 1 |
intromittent organ | 2.10e-23 | 1 |
lateral plate mesenchyme | 2.10e-23 | 1 |
undifferentiated genital tubercle | 2.10e-23 | 1 |
somatopleure | 2.10e-23 | 1 |
saliva-secreting gland | 6.71e-16 | 6 |
gland of oral region | 6.71e-16 | 6 |
gland of foregut | 6.71e-16 | 6 |
oral gland | 6.71e-16 | 6 |
oral cavity | 6.71e-16 | 6 |
skin gland | 2.90e-12 | 2 |
epidermis gland | 2.90e-12 | 2 |
gland of integumental system | 2.90e-12 | 2 |
sebaceous gland | 2.90e-12 | 2 |
skin sebaceous gland | 2.90e-12 | 2 |
sweat gland | 2.90e-12 | 2 |
sweat gland placode | 2.90e-12 | 2 |
sebaceous gland placode | 2.90e-12 | 2 |
gland of gut | 6.20e-10 | 10 |
oral opening | 9.69e-10 | 22 |
tongue | 1.40e-08 | 3 |
gustatory system | 1.40e-08 | 3 |
future tongue | 1.40e-08 | 3 |
mouth | 1.56e-07 | 29 |
stomodeum | 1.56e-07 | 29 |
exocrine gland | 4.30e-07 | 31 |
exocrine system | 4.30e-07 | 31 |
zone of skin | 7.27e-07 | 4 |
skin epidermis | 7.86e-07 | 15 |
outer epithelium | 7.86e-07 | 15 |
enveloping layer of ectoderm | 7.86e-07 | 15 |