FFCP PHASE1:Hg19::chr17:42298789..42298799,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-483bp_to_BC050302_5end | |||
|cluster_id=chr17:42298789..42298799,+ | |||
|description=CAGE_peak_1_at_BC050302_5end | |||
|id=chr17:42298789..42298799,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.35e-23;2!CL:0000558;4.35e-23;2!CL:0000047;7.60e-07;2!CL:0002561;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.91e-23,2;CL:0000765,3.91e-23,2;CL:0000050,3.91e-23,2;CL:0000038,3.91e-23,2;CL:0000558,3.91e-23,2;CL:0000547,3.91e-23,2;CL:0000549,3.91e-23,2;CL:0000550,3.91e-23,2;CL:0000552,3.91e-23,2;CL:0002561,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.96e-12;1!UBERON:0010226;1.96e-12;1!UBERON:0005425;1.96e-12;1!UBERON:0010122;4.55e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.12e-24!115;UBERON:0001017!2.07e-19!82;UBERON:0001049!5.23e-19!57;UBERON:0005068!5.23e-19!57;UBERON:0006241!5.23e-19!57;UBERON:0007135!5.23e-19!57;UBERON:0005743!9.48e-19!86;UBERON:0000073!5.66e-18!94;UBERON:0001016!5.66e-18!94;UBERON:0000955!1.80e-17!69;UBERON:0006238!1.80e-17!69;UBERON:0002616!1.75e-16!59;UBERON:0002020!2.13e-15!34;UBERON:0003528!2.13e-15!34;UBERON:0001893!2.71e-15!34;UBERON:0002780!4.83e-15!41;UBERON:0001890!4.83e-15!41;UBERON:0006240!4.83e-15!41;UBERON:0002791!1.17e-14!33;UBERON:0003080!1.92e-14!42;UBERON:0003075!4.75e-14!86;UBERON:0007284!4.75e-14!86;UBERON:0001869!1.20e-13!32;UBERON:0002346!1.86e-13!90;UBERON:0002619!1.20e-10!22;UBERON:0000153!1.64e-10!129;UBERON:0007811!1.64e-10!129;UBERON:0000033!3.47e-10!123;UBERON:0003056!3.86e-10!61;UBERON:0001950!2.14e-09!20;UBERON:0002308!3.57e-09!9;UBERON:0000125!3.57e-09!9;UBERON:0004121!4.67e-09!169;UBERON:0000924!7.31e-09!173;UBERON:0006601!7.31e-09!173;UBERON:0000956!9.67e-09!25;UBERON:0000203!9.67e-09!25;UBERON:0009663!1.93e-07!7;UBERON:0002420!2.79e-07!9;UBERON:0007245!2.79e-07!9;UBERON:0010009!2.79e-07!9;UBERON:0010011!2.79e-07!9;UBERON:0000454!2.79e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;9.76e-16;3!UBERON:0002084;1.96e-12;1!UBERON:0002079;1.96e-12;1!UBERON:0000941;1.96e-12;1!UBERON:0001785;1.96e-12;1!UBERON:0002464;1.96e-12;1!UBERON:0004904;1.96e-12;1!UBERON:0001021;1.96e-12;1!UBERON:0002082;1.96e-12;1!UBERON:0001873;4.55e-07;2!UBERON:0003714;7.60e-07;2!UBERON:0005162;7.60e-07;2!UBERON:0000122;7.60e-07;2!UBERON:0002081;7.60e-07;2!UBERON:0005933;7.60e-07;2!UBERON:0005942;7.60e-07;2!UBERON:0005932;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.38e-16,3;UBERON:0002084,7.89e-13,1;UBERON:0002082,7.89e-13,1;UBERON:0010226,7.89e-13,1;UBERON:0002079,1.96e-12,1;UBERON:0000941,2.20e-12,1;UBERON:0001785,2.20e-12,1;UBERON:0002464,2.20e-12,1;UBERON:0004904,2.20e-12,1;UBERON:0001021,2.20e-12,1;UBERON:0003902,2.20e-12,1;UBERON:0005425,2.20e-12,1;UBERON:0007023,2.16e-08,114;UBERON:0001873,4.56e-07,2;UBERON:0010122,4.56e-07,2;UBERON:0005933,7.20e-07,2;UBERON:0005942,7.20e-07,2;UBERON:0005932,7.20e-07,2;UBERON:0002081,7.61e-07,2;UBERON:0010227,7.61e-07,2;UBERON:0003714,8.06e-07,2;UBERON:0005162,8.06e-07,2;UBERON:0000122,8.06e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,1.90810750907073,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,1.44375896333917,0,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0,0.385029108839245,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,1.66435439510497,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,1.31555925987561,1.5686127061494,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0.290033387828457,0,0.801288320820636,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,1.52927441428475,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.222886768554957,0.284136146806413,0,0.890894042497916,0,0.994147647766298,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0.173624994933292,3.54296554325536,0.241192877250816,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.67401132980677,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0.343189995723929,0,0.124252535565433,0,0,0.104602846312333,0.305994652908965,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,0.415440338029185,0,0,0.303747783290123,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,1.42939065274673,1.98627591109629,0,0.542999601753713,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0.342173675768659,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.250381861413,1.14681839138014,0.332787154610557,0.931446044120752,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0.0788617450012534,0,0,0,0.642292250964595,0,0.159633859057151,0,0.252071696221718,0.553258019713743,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,1.45856363445986,0,0,0,0.175871244359621,0,0,0,0,0.91064876540519,0,0,0,0.339848664884159,0.460409414939944,0.354581522651905,0.111231401892069,0.078493092850514,0.942693539496011,0.280272163313789,0.913158720509496,0.215927591218621,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0.233939463462106,0,0.237840181555137,0,0.219881033490858,0.150962843566674,0,0,0,0,0.471353094203252,0.785233868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| |||
|short_description=p1@BC050302 | |||
}} |
Latest revision as of 17:22, 25 July 2015
Short description: | p1@BC050302 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC050302_5end |
Coexpression cluster: | NA |
Association with transcript: | -483bp_to_BC050302_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.91e-23 | 2 |
erythroblast | 3.91e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 3.91e-23 | 2 |
erythroid progenitor cell | 3.91e-23 | 2 |
reticulocyte | 3.91e-23 | 2 |
proerythroblast | 3.91e-23 | 2 |
basophilic erythroblast | 3.91e-23 | 2 |
polychromatophilic erythroblast | 3.91e-23 | 2 |
orthochromatic erythroblast | 3.91e-23 | 2 |
outer root sheath cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.38e-16 | 3 |
heart left ventricle | 7.89e-13 | 1 |
cardiac ventricle | 7.89e-13 | 1 |
future cardiac ventricle | 7.89e-13 | 1 |
left cardiac atrium | 1.96e-12 | 1 |
cranial nerve II | 2.20e-12 | 1 |
cranial nerve | 2.20e-12 | 1 |
nerve trunk | 2.20e-12 | 1 |
nerve connecting eye with brain | 2.20e-12 | 1 |
nerve | 2.20e-12 | 1 |
retinal neural layer | 2.20e-12 | 1 |
presumptive neural retina | 2.20e-12 | 1 |
adult organism | 2.16e-08 | 114 |
caudate nucleus | 4.56e-07 | 2 |
future caudate nucleus | 4.56e-07 | 2 |
hair root sheath | 7.20e-07 | 2 |
hair outer root sheath | 7.20e-07 | 2 |
bulb of hair follicle | 7.20e-07 | 2 |
cardiac atrium | 7.61e-07 | 2 |
future cardiac atrium | 7.61e-07 | 2 |
neural tissue | 8.06e-07 | 2 |
multi cell component structure | 8.06e-07 | 2 |
neuron projection bundle | 8.06e-07 | 2 |