FFCP PHASE1:Hg19::chr17:61228693..61228707,+: Difference between revisions
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|id=chr17:61228693..61228707,+
|short_description=p@chr17:61228693..61228707,+
|description=CAGE_peak_at_chr17:61228693..61228707,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:61228693..61228707,+ | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_at_chr17:61228693..61228707,+ | |||
|id=chr17:61228693..61228707,+ | |||
|ontology_enrichment_celltype=CL:0002605!1.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.82e-51;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.51e-13,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.62e-26;1!UBERON:0006241;1.53e-09;3!UBERON:0003056;1.53e-09;3!UBERON:0003057;1.53e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr17:61228693..61228707,+ | |||
}} | }} |
Latest revision as of 19:42, 25 July 2015
Short description: | p@chr17:61228693..61228707, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:61228693..61228707, + |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.51e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.09e-49 | 2 |
neuron projection bundle | 1.09e-49 | 2 |
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
olfactory region | 9.79e-26 | 1 |
primary subdivision of skull | 9.79e-26 | 1 |
cranium | 9.79e-26 | 1 |
neurocranium | 9.79e-26 | 1 |
chondrocranium | 9.79e-26 | 1 |
cartilaginous neurocranium | 9.79e-26 | 1 |
head paraxial mesoderm | 9.79e-26 | 1 |
corpus callosum | 1.26e-25 | 1 |
central nervous system cell part cluster | 1.26e-25 | 1 |
axon tract | 1.26e-25 | 1 |
intercerebral commissure | 1.26e-25 | 1 |
dorsal telencephalic commissure | 1.26e-25 | 1 |
brain white matter | 1.26e-25 | 1 |
brain commissure | 1.26e-25 | 1 |
white matter | 1.26e-25 | 1 |
nervous system commissure | 1.26e-25 | 1 |
cerebral hemisphere white matter | 1.26e-25 | 1 |
neural tissue | 1.07e-13 | 2 |
head mesenchyme | 1.37e-13 | 2 |
nervous system | 8.14e-10 | 89 |
spinal cord | 1.54e-09 | 3 |
dorsal region element | 1.54e-09 | 3 |
dorsum | 1.54e-09 | 3 |
central nervous system | 1.03e-07 | 81 |
layer of retina | 1.69e-07 | 4 |