FFCP PHASE1:Hg19::chr17:70421525..70421531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:70421525..70421531,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr17:70421525..70421531,+ | |description=CAGE_peak_at_chr17:70421525..70421531,+ | ||
|id=chr17:70421525..70421531,+ | |id=chr17:70421525..70421531,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.83e-37!24;CL:0000826!3.83e-37!24;CL:0000946!7.62e-26!1;CL:0000786!7.62e-26!1;CL:0000980!7.62e-26!1;CL:0000838!2.74e-17!52;CL:0000542!5.76e-17!53;CL:0000051!5.76e-17!53;CL:0000785!1.21e-13!2;CL:0000955!1.21e-13!2;CL:0000818!1.21e-13!2;CL:0000954!1.21e-13!2;CL:0000816!1.21e-13!2;CL:0000817!1.54e-09!3;CL:0002087!1.55e-07!119;CL:0000666!1.69e-07!4;CL:0002188!1.69e-07!4;CL:0002031!3.12e-07!124 | |ontology_enrichment_celltype=CL:0000945!3.83e-37!24;CL:0000826!3.83e-37!24;CL:0000946!7.62e-26!1;CL:0000786!7.62e-26!1;CL:0000980!7.62e-26!1;CL:0000838!2.74e-17!52;CL:0000542!5.76e-17!53;CL:0000051!5.76e-17!53;CL:0000785!1.21e-13!2;CL:0000955!1.21e-13!2;CL:0000818!1.21e-13!2;CL:0000954!1.21e-13!2;CL:0000816!1.21e-13!2;CL:0000817!1.54e-09!3;CL:0002087!1.55e-07!119;CL:0000666!1.69e-07!4;CL:0002188!1.69e-07!4;CL:0002031!3.12e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.19e-27;24!CL:0002188;3.49e-09;5!CL:0000542;2.52e-07;53!CL:1000746;6.39e-07;7!CL:1000612;6.39e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.19e-27,24;CL:0000826,5.19e-27,24;CL:0000838,6.81e-13,52;CL:0000542,1.16e-12,53;CL:0000051,1.16e-12,53;CL:0002188,3.49e-09,5;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000051;2.52e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;6.39e-07;7!UBERON:0001229;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7 | |||
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|short_description=p@chr17:70421525..70421531,+ | |short_description=p@chr17:70421525..70421531,+ | ||
}} | }} |
Latest revision as of 20:33, 25 July 2015
Short description: | p@chr17:70421525..70421531, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:70421525..70421531, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.19e-27 | 24 |
pro-B cell | 5.19e-27 | 24 |
lymphoid lineage restricted progenitor cell | 6.81e-13 | 52 |
lymphocyte | 1.16e-12 | 53 |
common lymphoid progenitor | 1.16e-12 | 53 |
glomerular endothelial cell | 3.49e-09 | 5 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |