FFCP PHASE1:Hg19::chr17:79990035..79990049,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79990035..79990049,+ | |||
|coexpression_cluster_id=C3701 | |coexpression_cluster_id=C3701 | ||
|description=CAGE_peak_at_chr17:79990035..79990049,+ | |description=CAGE_peak_at_chr17:79990035..79990049,+ | ||
|id=chr17:79990035..79990049,+ | |id=chr17:79990035..79990049,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.73e-14!254;CL:0002076!6.98e-12!43;CL:0000223!7.96e-09!59;CL:0002321!1.12e-08!248;CL:0002368!3.59e-08!13;CL:0000220!6.34e-08!246;CL:0002322!6.43e-07!5 | |ontology_enrichment_celltype=CL:0000066!4.73e-14!254;CL:0002076!6.98e-12!43;CL:0000223!7.96e-09!59;CL:0002321!1.12e-08!248;CL:0002368!3.59e-08!13;CL:0000220!6.34e-08!246;CL:0002322!6.43e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.08e-17;5!CL:0002328;3.95e-10;3!CL:0000240;9.34e-09;6!CL:0000311;9.34e-09;6!CL:0000079;9.34e-09;6!CL:0000237;9.34e-09;6!CL:0002159;1.27e-07;14!CL:0002321;1.66e-07;15!CL:0000575;1.74e-07;2!CL:0002076;2.84e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.47e-17,5;CL:0002328,2.40e-10,3;CL:0000240,1.23e-08,6;CL:0000311,1.23e-08,6;CL:0000079,1.23e-08,6;CL:0000237,1.23e-08,6;CL:0000036,1.23e-08,6;CL:0000357,1.23e-08,6;CL:0000114,1.23e-08,6;CL:0002076,1.33e-07,42;CL:0002159,1.39e-07,14;CL:0000575,1.41e-07,2;CL:0000066,3.21e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000357;9.34e-09;6!CL:0000114;9.34e-09;6 | |||
|ontology_enrichment_disease=DOID:1036!5.45e-07!8;DOID:1749!7.16e-07!14 | |ontology_enrichment_disease=DOID:1036!5.45e-07!8;DOID:1749!7.16e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1036;7.38e-11;8!DOID:8692;4.42e-09;31!DOID:1240;2.50e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.72e-11,8;DOID:8692,5.17e-09,31;DOID:1240,3.65e-08,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000485;9.03e-12;7!UBERON:0004815;3.95e-10;3!UBERON:0002031;3.95e-10;3!UBERON:0000964;8.93e-08;4!UBERON:0010409;8.93e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.40e-10,3;UBERON:0002031,2.40e-10,3;UBERON:0000485,3.39e-09,9;UBERON:0000964,1.05e-07,4;UBERON:0010409,1.05e-07,4;UBERON:0004348,1.05e-07,4;UBERON:0005427,1.05e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,2.75826367343678,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.665188192387692,0.351339142772504,0.130979075497713,3.64295288292542,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,3.90315859614705,3.71083351300159,3.36962434321603,2.69518743039963,6.30802127189071,7.2995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,5.53447973444011,0.171567810298526,1.31700342490351,1.1240175325762,0.201057944823262,2.12953423864618,0,1.03993478527958,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,1.62786481617433,0,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9319611063036,0.601519410909855,0.184161977871793,0,0,0.131124414959424,0.902399225814824,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,0,1.30012049207304,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0.495854746082934,0.192190067365106,0.382838137483752,0.809262246844399,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,1.51789269506286,0.699869440489966,0.769776901804097,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,4.91390727186376,0,0.980160863924127,0,0,0,0,0,0,0,5.51857298466744,0,1.36940807419915,8.61739426751628,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,3.12620952643264,1.11362469558097,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33505999976794,0,1.70690172428249,2.03402920234213,1.18193840883968,0.689486746482929,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.46112780877612,0.359030577639089,0.434589487688032,0,0,0,0,2.19772358953035,0,9.70061340653877,7.05825123543862,4.53118284834775,5.88236571444974,0.317873157960757,0,0,8.48118428603645,0.649165919226273,0,0,0,0,0,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0.829505531177977,0,0,0,0,4.83836228250648,0,0,0.391969589657511,0.261177619741208,1.22308667769421,0,0,0,0,0,0,0,0,0.19871461170299,0,1.36885967914362,0,0,0,0,0.229073192331831,0.171594997861965,0,0.124252535565433,0.942776138467182,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,7.39464482939088,14.716719715904,16.6176135211674,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,10.4250100438447,0,0,0,0,0.410462603746695,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0.306345576763462,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0.499921631848426,0,0,0,2.34167452903441,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.516644938982447,0,0,0.699397538597222,0,0,0,0,0.109209638192014,0,0,0,1.11728983594649,0,0.47317047000752,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,17.2739984561805,7.43209257090764,0.183428598521679,0,0,0,1.79024599904647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,1.18193840883968,0.111231401892069,0,0,0,0,0,0,0,0,9.53179688018627,0.695433089210318,0,0.207216164163037,0,0,0.430227358820278,0.236664001461131,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.447421727191169,0,0,0,0,0,0.971421986118279,0,1.59160620129095,0,0.79062257427272,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,1.10440093535229,0,0,0,0,0,0,1.26166424835079,0,1.52038201213724,0.509944148709909,2.6721740526556,0,0.250707539292375,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,1.3874554964103,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,2.75826367343678,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.665188192387692,0.351339142772504,0.130979075497713,3.64295288292542,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,3.90315859614705,3.71083351300159,3.36962434321603,2.69518743039963,6.30802127189071,7.2995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,5.53447973444011,0.171567810298526,1.31700342490351,1.1240175325762,0.201057944823262,2.12953423864618,0,1.03993478527958,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,1.62786481617433,0,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9319611063036,0.601519410909855,0.184161977871793,0,0,0.131124414959424,0.902399225814824,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,0,1.30012049207304,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0.495854746082934,0.192190067365106,0.382838137483752,0.809262246844399,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,1.51789269506286,0.699869440489966,0.769776901804097,0.670302275535787,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,4.91390727186376,0,0.980160863924127,0,0,0,0,0,0,0,5.51857298466744,0,1.36940807419915,8.61739426751628,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,3.12620952643264,1.11362469558097,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33505999976794,0,1.70690172428249,2.03402920234213,1.18193840883968,0.689486746482929,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.46112780877612,0.359030577639089,0.434589487688032,0,0,0,0,2.19772358953035,0,9.70061340653877,7.05825123543862,4.53118284834775,5.88236571444974,0.317873157960757,0,0,8.48118428603645,0.649165919226273,0,0,0,0,0,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0.829505531177977,0,0,0,0,4.83836228250648,0,0,0.391969589657511,0.261177619741208,1.22308667769421,0,0,0,0,0,0,0,0,0.19871461170299,0,1.36885967914362,0,0,0,0,0.229073192331831,0.171594997861965,0,0.124252535565433,0.942776138467182,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,7.39464482939088,14.716719715904,16.6176135211674,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,10.4250100438447,0,0,0,0,0.410462603746695,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0.306345576763462,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0.499921631848426,0,0,0,2.34167452903441,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.516644938982447,0,0,0.699397538597222,0,0,0,0,0.109209638192014,0,0,0,1.11728983594649,0,0.47317047000752,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,17.2739984561805,7.43209257090764,0.183428598521679,0,0,0,1.79024599904647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,1.18193840883968,0.111231401892069,0,0,0,0,0,0,0,0,9.53179688018627,0.695433089210318,0,0.207216164163037,0,0,0.430227358820278,0.236664001461131,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.447421727191169,0,0,0,0,0,0.971421986118279,0,1.59160620129095,0,0.79062257427272,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,1.10440093535229,0,0,0,0,0,0,1.26166424835079,0,1.52038201213724,0.509944148709909,2.6721740526556,0,0.250707539292375,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,1.3874554964103,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:79990035..79990049,+ | |short_description=p@chr17:79990035..79990049,+ | ||
}} | }} |
Latest revision as of 22:58, 25 July 2015
Short description: | p@chr17:79990035..79990049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79990035..79990049, + |
Coexpression cluster: | C3701_iPS_oral_HES3GFP_Alveolar_leiomyoblastoma_rhabdomyosarcoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.47e-17 | 5 |
bronchial epithelial cell | 2.40e-10 | 3 |
stratified squamous epithelial cell | 1.23e-08 | 6 |
keratin accumulating cell | 1.23e-08 | 6 |
stratified epithelial cell | 1.23e-08 | 6 |
keratinizing barrier epithelial cell | 1.23e-08 | 6 |
epithelial fate stem cell | 1.23e-08 | 6 |
stratified epithelial stem cell | 1.23e-08 | 6 |
surface ectodermal cell | 1.23e-08 | 6 |
endo-epithelial cell | 1.33e-07 | 42 |
general ecto-epithelial cell | 1.39e-07 | 14 |
corneal epithelial cell | 1.41e-07 | 2 |
epithelial cell | 3.21e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.40e-10 | 3 |
epithelium of bronchus | 2.40e-10 | 3 |
simple columnar epithelium | 3.39e-09 | 9 |
cornea | 1.05e-07 | 4 |
eye surface | 1.05e-07 | 4 |
optic eminence | 1.05e-07 | 4 |
corneal primordium | 1.05e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.72e-11 | 8 |
myeloid leukemia | 5.17e-09 | 31 |
leukemia | 3.65e-08 | 39 |