FFCP PHASE1:Hg19::chr18:21483933..21483967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21483933..21483967,- | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21483933..21483967,- | |description=CAGE_peak_at_chr18:21483933..21483967,- | ||
|id=chr18:21483933..21483967,- | |id=chr18:21483933..21483967,- | ||
|ontology_enrichment_celltype=CL:0002076!1.10e-27!43;CL:0000066!1.81e-27!254;CL:0000223!2.60e-18!59;CL:0002251!6.45e-12!21;CL:0002368!1.36e-11!13;CL:0002166!4.59e-09!3;CL:0002621!6.44e-09!3;CL:0000349!7.93e-09!3;CL:0002577!7.93e-09!3;CL:0002328!1.47e-08!3;CL:0002178!2.33e-07!3;CL:0002159!4.43e-07!13;CL:0002327!9.91e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.10e-27!43;CL:0000066!1.81e-27!254;CL:0000223!2.60e-18!59;CL:0002251!6.45e-12!21;CL:0002368!1.36e-11!13;CL:0002166!4.59e-09!3;CL:0002621!6.44e-09!3;CL:0000349!7.93e-09!3;CL:0002577!7.93e-09!3;CL:0002328!1.47e-08!3;CL:0002178!2.33e-07!3;CL:0002159!4.43e-07!13;CL:0002327!9.91e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002577;4.55e-24;3!CL:0000349;1.55e-14;19!CL:0002159;2.92e-14;14!CL:0000240;1.39e-12;6!CL:0000311;1.39e-12;6!CL:0000079;1.39e-12;6!CL:0000237;1.39e-12;6!CL:0002166;5.27e-12;3!CL:0002621;1.07e-11;3!CL:0002336;2.45e-09;1!CL:0002261;2.45e-09;1!CL:0002170;2.45e-09;1!CL:0002327;3.07e-09;4!CL:0002076;3.24e-09;42!CL:0000362;1.74e-08;9!CL:0000312;2.51e-07;5!CL:0002537;3.18e-07;5!CL:0002077;6.64e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.52e-24,3;CL:0000349,1.88e-14,19;CL:0002159,2.50e-14,14;CL:0000240,1.26e-12,6;CL:0000311,1.26e-12,6;CL:0000079,1.26e-12,6;CL:0000237,1.26e-12,6;CL:0000036,1.26e-12,6;CL:0000357,1.26e-12,6;CL:0000114,1.26e-12,6;CL:0002166,5.42e-12,3;CL:0002621,9.32e-12,3;CL:0000066,1.08e-11,253;CL:0002076,2.69e-11,42;CL:0002336,2.35e-09,1;CL:0002261,2.35e-09,1;CL:0002170,2.35e-09,1;CL:0002327,3.01e-09,4;CL:0000362,1.49e-08,9;CL:0002077,4.35e-08,34;CL:0000223,6.96e-08,58;CL:0000312,2.36e-07,5;CL:0002537,3.45e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;1.39e-12;6!CL:0000114;1.39e-12;6 | |||
|ontology_enrichment_disease=DOID:1749!1.75e-12!14;DOID:305!3.79e-09!106;DOID:299!8.67e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.03e-16!14;UBERON:0000158!1.03e-16!14;UBERON:0004119!2.34e-13!169;UBERON:0000925!2.34e-13!169;UBERON:0006595!2.34e-13!169;UBERON:0003124!6.06e-13!7;UBERON:0001987!1.12e-10!4;UBERON:0004340!1.12e-10!4;UBERON:0001949!6.44e-09!3;UBERON:0003100!7.67e-09!41;UBERON:0000478!8.19e-09!24;UBERON:0005153!1.07e-08!37;UBERON:0001004!1.21e-08!72;UBERON:0004815!1.47e-08!3;UBERON:0002031!1.47e-08!3;UBERON:0004923!2.52e-08!57;UBERON:0000365!3.70e-08!5;UBERON:0000995!4.09e-08!21;UBERON:0005795!1.15e-07!22;UBERON:0003975!1.15e-07!22;UBERON:0005911!4.40e-07!82;UBERON:0001708!7.29e-07!4;UBERON:0001704!7.29e-07!4;UBERON:0005910!8.63e-07!6;UBERON:0001911!9.91e-07!4;UBERON:0005333!9.91e-07!4;UBERON:0008425!9.91e-07!4;UBERON:0005311!9.91e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.23e-18;4!UBERON:0001949;1.07e-11;3!UBERON:0000478;2.05e-11;24!UBERON:0001911;3.07e-09;4!UBERON:0001708;3.20e-09;4!UBERON:0008895;3.20e-09;4!UBERON:0005631;9.49e-08;10!UBERON:0000158;9.49e-08;10!UBERON:0011159;1.53e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.31e-20,14;UBERON:0000158,9.31e-20,14;UBERON:0003124,2.99e-18,7;UBERON:0001987,4.22e-18,4;UBERON:0004340,4.22e-18,4;UBERON:0001949,9.32e-12,3;UBERON:0000478,2.39e-11,24;UBERON:0001911,3.01e-09,4;UBERON:0005333,3.01e-09,4;UBERON:0008425,3.01e-09,4;UBERON:0005311,3.01e-09,4;UBERON:0001708,3.26e-09,4;UBERON:0008895,3.26e-09,4;UBERON:0004923,2.17e-08,66;UBERON:0011159,1.55e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21804303540901,0.818238361772504,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7192622725709,0,1.70899253099772,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,7.22323151255096,3.54437743105966,11.4634909059646,3.77824120068151,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01519410909855,0.644566922551274,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,4.79326254546837,5.38132188622297,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0.43050537267123,0,0.443430153536676,3.90529780351831,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.43246690842614,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,4.26427820814908,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0.685946781900644,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.699397538597222,2.48830904013189,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0.62164849248911,0.17071847709395,0,0,0.236664001461131,0,0,3.2074961596167,0,0.955538938977433,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21804303540901,0.818238361772504,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7192622725709,0,1.70899253099772,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,7.22323151255096,3.54437743105966,11.4634909059646,3.77824120068151,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01519410909855,0.644566922551274,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,4.79326254546837,5.38132188622297,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0.43050537267123,0,0.443430153536676,3.90529780351831,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.43246690842614,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,4.26427820814908,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0.685946781900644,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.699397538597222,2.48830904013189,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0.62164849248911,0.17071847709395,0,0,0.236664001461131,0,0,3.2074961596167,0,0.955538938977433,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21483933..21483967,- | |short_description=p@chr18:21483933..21483967,- | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21483933..21483967, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21483933..21483967, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.52e-24 | 3 |
extraembryonic cell | 1.88e-14 | 19 |
general ecto-epithelial cell | 2.50e-14 | 14 |
stratified squamous epithelial cell | 1.26e-12 | 6 |
keratin accumulating cell | 1.26e-12 | 6 |
stratified epithelial cell | 1.26e-12 | 6 |
keratinizing barrier epithelial cell | 1.26e-12 | 6 |
epithelial fate stem cell | 1.26e-12 | 6 |
stratified epithelial stem cell | 1.26e-12 | 6 |
surface ectodermal cell | 1.26e-12 | 6 |
epithelial cell of Malassez | 5.42e-12 | 3 |
gingival epithelial cell | 9.32e-12 | 3 |
epithelial cell | 1.08e-11 | 253 |
endo-epithelial cell | 2.69e-11 | 42 |
buccal mucosa cell | 2.35e-09 | 1 |
endothelial cell of viscerocranial mucosa | 2.35e-09 | 1 |
keratinized cell of the oral mucosa | 2.35e-09 | 1 |
mammary gland epithelial cell | 3.01e-09 | 4 |
epidermal cell | 1.49e-08 | 9 |
ecto-epithelial cell | 4.35e-08 | 34 |
endodermal cell | 6.96e-08 | 58 |
keratinocyte | 2.36e-07 | 5 |
amnion mesenchymal stem cell | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.31e-20 | 14 |
membranous layer | 9.31e-20 | 14 |
chorion | 2.99e-18 | 7 |
placenta | 4.22e-18 | 4 |
allantois | 4.22e-18 | 4 |
gingival epithelium | 9.32e-12 | 3 |
extraembryonic structure | 2.39e-11 | 24 |
mammary gland | 3.01e-09 | 4 |
mammary bud | 3.01e-09 | 4 |
mammary ridge | 3.01e-09 | 4 |
mammary placode | 3.01e-09 | 4 |
jaw skeleton | 3.26e-09 | 4 |
splanchnocranium | 3.26e-09 | 4 |
organ component layer | 2.17e-08 | 66 |
primary subdivision of cranial skeletal system | 1.55e-07 | 5 |