FFCP PHASE1:Hg19::chr18:21531667..21531694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21531667..21531694,+ | |||
|coexpression_cluster_id=C363 | |coexpression_cluster_id=C363 | ||
|description=CAGE_peak_at_chr18:21531667..21531694,+ | |description=CAGE_peak_at_chr18:21531667..21531694,+ | ||
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|ontology_enrichment_celltype=CL:0002076!1.45e-20!43;CL:0000066!7.78e-17!254;CL:0000223!5.01e-14!59;CL:0002251!9.78e-14!21;CL:0002159!7.70e-11!13;CL:0000622!1.02e-09!5;CL:0000150!3.68e-09!9;CL:0000154!5.40e-08!6;CL:0002621!3.53e-07!3;CL:0002166!5.20e-07!3;CL:0002541!6.66e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.45e-20!43;CL:0000066!7.78e-17!254;CL:0000223!5.01e-14!59;CL:0002251!9.78e-14!21;CL:0002159!7.70e-11!13;CL:0000622!1.02e-09!5;CL:0000150!3.68e-09!9;CL:0000154!5.40e-08!6;CL:0002621!3.53e-07!3;CL:0002166!5.20e-07!3;CL:0002541!6.66e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;7.41e-21;3!CL:0002076;3.76e-20;42!CL:0002327;3.99e-15;4!CL:0000349;5.82e-12;19!CL:0000622;7.47e-12;5!CL:0002159;9.66e-12;14!CL:0002251;3.79e-11;20!CL:0000240;2.58e-10;6!CL:0000311;2.58e-10;6!CL:0000079;2.58e-10;6!CL:0000237;2.58e-10;6!CL:0002166;4.11e-10;3!CL:0002541;4.80e-10;3!CL:0000154;5.78e-10;6!CL:0002231;9.51e-10;3!CL:0002623;3.67e-09;3!CL:0002368;4.05e-08;13!CL:0002336;1.18e-07;1!CL:0002261;1.18e-07;1!CL:0002170;1.18e-07;1!CL:0000362;4.46e-07;9!CL:0000150;8.47e-07;9 | |ontology_enrichment_celltype_v019=CL:0002621;7.41e-21;3!CL:0002076;3.76e-20;42!CL:0002327;3.99e-15;4!CL:0000349;5.82e-12;19!CL:0000622;7.47e-12;5!CL:0002159;9.66e-12;14!CL:0002251;3.79e-11;20!CL:0000240;2.58e-10;6!CL:0000311;2.58e-10;6!CL:0000079;2.58e-10;6!CL:0000237;2.58e-10;6!CL:0002166;4.11e-10;3!CL:0002541;4.80e-10;3!CL:0000154;5.78e-10;6!CL:0002231;9.51e-10;3!CL:0002623;3.67e-09;3!CL:0002368;4.05e-08;13!CL:0002336;1.18e-07;1!CL:0002261;1.18e-07;1!CL:0002170;1.18e-07;1!CL:0000362;4.46e-07;9!CL:0000150;8.47e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.46e-23,42;CL:0002621,6.94e-21,3;CL:0000223,3.29e-16,58;CL:0002327,3.62e-15,4;CL:0000066,1.05e-13,253;CL:0000349,5.76e-12,19;CL:0000622,7.90e-12,5;CL:0002159,9.66e-12,14;CL:0002251,3.79e-11,20;CL:0000240,2.50e-10,6;CL:0000311,2.50e-10,6;CL:0000079,2.50e-10,6;CL:0000237,2.50e-10,6;CL:0000036,2.50e-10,6;CL:0000357,2.50e-10,6;CL:0000114,2.50e-10,6;CL:0002166,4.20e-10,3;CL:0002541,4.59e-10,3;CL:0000154,6.06e-10,6;CL:0002231,1.06e-09,3;CL:0002623,4.17e-09,3;CL:0002368,3.97e-08,13;CL:0002336,1.04e-07,1;CL:0002261,1.04e-07,1;CL:0002170,1.04e-07,1;CL:0000362,4.41e-07,9;CL:0000150,8.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.58e-10;6!CL:0000114;2.58e-10;6!CL:0000223;9.70e-09;58 | |ontology_enrichment_development_v019=CL:0000357;2.58e-10;6!CL:0000114;2.58e-10;6!CL:0000223;9.70e-09;58 | ||
|ontology_enrichment_disease=DOID:1749!1.13e-09!14 | |ontology_enrichment_disease=DOID:1749!1.13e-09!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.04e-17!14;UBERON:0000158!2.04e-17!14;UBERON:0003124!6.85e-13!7;UBERON:0000478!2.39e-10!24;UBERON:0004119!6.18e-10!169;UBERON:0000925!6.18e-10!169;UBERON:0006595!6.18e-10!169;UBERON:0003100!2.90e-09!41;UBERON:0000161!3.32e-09!35;UBERON:0005156!3.64e-09!59;UBERON:0000990!3.64e-09!59;UBERON:0004175!8.40e-09!25;UBERON:0004923!3.79e-08!57;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0003975!2.16e-07!22;UBERON:0001949!3.53e-07!3;UBERON:0000476!6.66e-07!3;UBERON:0000920!6.66e-07!3;UBERON:0003133!7.37e-07!48;UBERON:0003134!9.05e-07!37;UBERON:0000474!9.05e-07!37;UBERON:0000305!9.72e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!2.04e-17!14;UBERON:0000158!2.04e-17!14;UBERON:0003124!6.85e-13!7;UBERON:0000478!2.39e-10!24;UBERON:0004119!6.18e-10!169;UBERON:0000925!6.18e-10!169;UBERON:0006595!6.18e-10!169;UBERON:0003100!2.90e-09!41;UBERON:0000161!3.32e-09!35;UBERON:0005156!3.64e-09!59;UBERON:0000990!3.64e-09!59;UBERON:0004175!8.40e-09!25;UBERON:0004923!3.79e-08!57;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0003975!2.16e-07!22;UBERON:0001949!3.53e-07!3;UBERON:0000476!6.66e-07!3;UBERON:0000920!6.66e-07!3;UBERON:0003133!7.37e-07!48;UBERON:0003134!9.05e-07!37;UBERON:0000474!9.05e-07!37;UBERON:0000305!9.72e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.41e-21;3!UBERON:0005631;2.62e-16;10!UBERON:0000158;2.62e-16;10!UBERON:0001911;3.99e-15;4!UBERON:0003124;4.80e-10;3!UBERON:0000920;4.80e-10;3!UBERON:0000478;2.35e-09;24!UBERON:0003929;3.12e-09;7!UBERON:0000486;4.06e-09;12!UBERON:0000305;7.72e-09;7!UBERON:0000161;2.19e-08;19!UBERON:0000166;2.19e-08;19!UBERON:0003729;2.42e-08;13!UBERON:0003350;3.93e-08;8!UBERON:0001828;3.93e-08;8!UBERON:0000165;8.27e-08;28!UBERON:0001708;8.67e-08;4!UBERON:0008895;8.67e-08;4!UBERON:0010371;5.08e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001949;7.41e-21;3!UBERON:0005631;2.62e-16;10!UBERON:0000158;2.62e-16;10!UBERON:0001911;3.99e-15;4!UBERON:0003124;4.80e-10;3!UBERON:0000920;4.80e-10;3!UBERON:0000478;2.35e-09;24!UBERON:0003929;3.12e-09;7!UBERON:0000486;4.06e-09;12!UBERON:0000305;7.72e-09;7!UBERON:0000161;2.19e-08;19!UBERON:0000166;2.19e-08;19!UBERON:0003729;2.42e-08;13!UBERON:0003350;3.93e-08;8!UBERON:0001828;3.93e-08;8!UBERON:0000165;8.27e-08;28!UBERON:0001708;8.67e-08;4!UBERON:0008895;8.67e-08;4!UBERON:0010371;5.08e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.94e-21,3;UBERON:0005631,2.00e-16,14;UBERON:0000158,2.00e-16,14;UBERON:0001911,3.62e-15,4;UBERON:0005333,3.62e-15,4;UBERON:0008425,3.62e-15,4;UBERON:0005311,3.62e-15,4;UBERON:0000920,4.59e-10,3;UBERON:0000478,2.33e-09,24;UBERON:0003124,3.04e-09,7;UBERON:0000305,8.15e-09,7;UBERON:0003102,1.25e-08,99;UBERON:0003729,2.28e-08,13;UBERON:0004923,2.95e-08,66;UBERON:0003350,3.84e-08,8;UBERON:0001828,3.84e-08,8;UBERON:0000161,5.11e-08,36;UBERON:0000076,7.85e-08,8;UBERON:0001708,8.82e-08,4;UBERON:0008895,8.82e-08,4;UBERON:0004871,9.04e-08,8;UBERON:0000165,1.61e-07,29;UBERON:0000930,1.61e-07,29;UBERON:0000166,3.38e-07,22;UBERON:0002365,7.06e-07,31;UBERON:0002330,7.06e-07,31 | |||
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| ||
|short_description=p@chr18:21531667..21531694,+ | |short_description=p@chr18:21531667..21531694,+ | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21531667..21531694, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21531667..21531694, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.46e-23 | 42 |
gingival epithelial cell | 6.94e-21 | 3 |
endodermal cell | 3.29e-16 | 58 |
mammary gland epithelial cell | 3.62e-15 | 4 |
epithelial cell | 1.05e-13 | 253 |
extraembryonic cell | 5.76e-12 | 19 |
acinar cell | 7.90e-12 | 5 |
general ecto-epithelial cell | 9.66e-12 | 14 |
epithelial cell of alimentary canal | 3.79e-11 | 20 |
stratified squamous epithelial cell | 2.50e-10 | 6 |
keratin accumulating cell | 2.50e-10 | 6 |
stratified epithelial cell | 2.50e-10 | 6 |
keratinizing barrier epithelial cell | 2.50e-10 | 6 |
epithelial fate stem cell | 2.50e-10 | 6 |
stratified epithelial stem cell | 2.50e-10 | 6 |
surface ectodermal cell | 2.50e-10 | 6 |
epithelial cell of Malassez | 4.20e-10 | 3 |
chorionic membrane mesenchymal stem cell | 4.59e-10 | 3 |
protein secreting cell | 6.06e-10 | 6 |
epithelial cell of prostate | 1.06e-09 | 3 |
acinar cell of salivary gland | 4.17e-09 | 3 |
respiratory epithelial cell | 3.97e-08 | 13 |
buccal mucosa cell | 1.04e-07 | 1 |
endothelial cell of viscerocranial mucosa | 1.04e-07 | 1 |
keratinized cell of the oral mucosa | 1.04e-07 | 1 |
epidermal cell | 4.41e-07 | 9 |
glandular epithelial cell | 8.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.94e-21 | 3 |
extraembryonic membrane | 2.00e-16 | 14 |
membranous layer | 2.00e-16 | 14 |
mammary gland | 3.62e-15 | 4 |
mammary bud | 3.62e-15 | 4 |
mammary ridge | 3.62e-15 | 4 |
mammary placode | 3.62e-15 | 4 |
egg chorion | 4.59e-10 | 3 |
extraembryonic structure | 2.33e-09 | 24 |
chorion | 3.04e-09 | 7 |
amnion | 8.15e-09 | 7 |
surface structure | 1.25e-08 | 99 |
mouth mucosa | 2.28e-08 | 13 |
organ component layer | 2.95e-08 | 66 |
epithelium of mucosa | 3.84e-08 | 8 |
gingiva | 3.84e-08 | 8 |
orifice | 5.11e-08 | 36 |
external ectoderm | 7.85e-08 | 8 |
jaw skeleton | 8.82e-08 | 4 |
splanchnocranium | 8.82e-08 | 4 |
somatic layer of lateral plate mesoderm | 9.04e-08 | 8 |
mouth | 1.61e-07 | 29 |
stomodeum | 1.61e-07 | 29 |
oral opening | 3.38e-07 | 22 |
exocrine gland | 7.06e-07 | 31 |
exocrine system | 7.06e-07 | 31 |