FFCP PHASE1:Hg19::chr19:18901074..18901086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18901074..18901086,+ | |||
|coexpression_cluster_id=C423 | |||
|description=CAGE_peak_at_chr19:18901074..18901086,+ | |description=CAGE_peak_at_chr19:18901074..18901086,+ | ||
|id=chr19:18901074..18901086,+ | |id=chr19:18901074..18901086,+ | ||
|ontology_enrichment_celltype=CL:0000153!4.61e-15!9;CL:0000447!4.61e-15!9;CL:0000667!4.69e-12!6;CL:0000058!4.69e-12!6;CL:0000138!4.69e-12!6;CL:0000136!4.40e-11!15;CL:0002580!1.07e-09!3;CL:0002615!1.45e-09!3;CL:0000327!3.05e-09!14;CL:0000135!3.15e-09!3;CL:0000386!3.15e-09!3;CL:0000388!3.15e-09!3;CL:0002620!4.33e-09!23;CL:0002579!4.75e-09!3;CL:0000499!1.22e-08!27;CL:0002334!4.28e-08!12;CL:0000057!4.61e-08!75;CL:0002617!5.63e-07!2 | |ontology_enrichment_celltype=CL:0000153!4.61e-15!9;CL:0000447!4.61e-15!9;CL:0000667!4.69e-12!6;CL:0000058!4.69e-12!6;CL:0000138!4.69e-12!6;CL:0000136!4.40e-11!15;CL:0002580!1.07e-09!3;CL:0002615!1.45e-09!3;CL:0000327!3.05e-09!14;CL:0000135!3.15e-09!3;CL:0000386!3.15e-09!3;CL:0000388!3.15e-09!3;CL:0002620!4.33e-09!23;CL:0002579!4.75e-09!3;CL:0000499!1.22e-08!27;CL:0002334!4.28e-08!12;CL:0000057!4.61e-08!75;CL:0002617!5.63e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.10e-31;9!CL:0000447;4.10e-31;9!CL:0002580;7.40e-25;3!CL:0002615;1.02e-24;3!CL:0000138;2.57e-21;6!CL:0000327;1.59e-18;15!CL:0002617;3.23e-17;2!CL:0000136;2.14e-15;13!CL:0000499;3.38e-13;28!CL:0000214;1.59e-11;3!CL:0002334;4.46e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.84e-31,9;CL:0000447,2.84e-31,9;CL:0002580,5.37e-25,3;CL:0002615,1.31e-24,3;CL:0000058,1.78e-21,6;CL:0000138,1.78e-21,6;CL:0000136,1.10e-18,15;CL:0000327,1.28e-18,15;CL:0002617,3.67e-17,2;CL:0000499,2.96e-13,28;CL:0000214,1.59e-11,3;CL:0002334,4.24e-11,12;CL:0000151,1.73e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.58e-17!6;UBERON:0002358!6.58e-17!6;UBERON:0003684!6.58e-17!6;UBERON:0001178!6.58e-17!6;UBERON:0004457!3.55e-14!12;UBERON:0000042!3.55e-14!12;UBERON:0000310!3.21e-10!10;UBERON:0000043!3.15e-09!3;UBERON:0001443!3.28e-09!11;UBERON:0003978!3.72e-09!3;UBERON:0009751!3.72e-09!3;UBERON:0000946!3.72e-09!3;UBERON:0002523!3.72e-09!3;UBERON:0005983!3.72e-09!3;UBERON:0002165!3.72e-09!3;UBERON:0002062!3.72e-09!3;UBERON:0007280!3.72e-09!3;UBERON:0002133!8.13e-07!2 | |ontology_enrichment_uberon=UBERON:0003688!6.58e-17!6;UBERON:0002358!6.58e-17!6;UBERON:0003684!6.58e-17!6;UBERON:0001178!6.58e-17!6;UBERON:0004457!3.55e-14!12;UBERON:0000042!3.55e-14!12;UBERON:0000310!3.21e-10!10;UBERON:0000043!3.15e-09!3;UBERON:0001443!3.28e-09!11;UBERON:0003978!3.72e-09!3;UBERON:0009751!3.72e-09!3;UBERON:0000946!3.72e-09!3;UBERON:0002523!3.72e-09!3;UBERON:0005983!3.72e-09!3;UBERON:0002165!3.72e-09!3;UBERON:0002062!3.72e-09!3;UBERON:0007280!3.72e-09!3;UBERON:0002133!8.13e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.20e-31;9!UBERON:0000042;1.20e-31;9!UBERON:0000310;1.57e-28;10!UBERON:0001443;6.63e-26;11!UBERON:0003688;7.54e-22;6!UBERON:0002358;7.54e-22;6!UBERON:0003684;7.54e-22;6!UBERON:0001178;7.54e-22;6!UBERON:0006915;1.59e-11;3!UBERON:0007616;1.59e-11;3!UBERON:0002217;1.59e-11;3!UBERON:0002018;1.59e-11;3!UBERON:0002135;1.11e-09;1!UBERON:0000996;2.88e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.13e-28,10;UBERON:0001443,4.92e-26,11;UBERON:0004457,1.48e-23,12;UBERON:0000042,1.48e-23,12;UBERON:0003688,9.90e-22,6;UBERON:0002358,9.90e-22,6;UBERON:0003684,9.90e-22,6;UBERON:0001178,9.90e-22,6;UBERON:0006915,1.59e-11,3;UBERON:0007616,1.59e-11,3;UBERON:0002217,1.59e-11,3;UBERON:0002018,1.59e-11,3;UBERON:0002135,1.12e-09,1;UBERON:0000996,2.35e-09,1;UBERON:0009569,6.79e-07,112;UBERON:0000915,6.97e-07,52 | |||
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|phase1_expression=2.18014055124668,1.2846031433459,1.40954404095971,1.0007329835313,2.68176656656373,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.30361867064741,1.5905718941022,1.94653948121054,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0.18611685633159,1.18143432568886,0.292311015483596,0.252433774244115,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,7.82656063769118,1.12264037773229,0.640695746278505,2.04682899626681,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,1.52581736317083,0.774054819518572,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0.458320848023367,0.717873024576814,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.971421986118279,0,0.198950775161368,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34795516350076,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0.342233301085281,0,0.286888821570705,2.66128285236811,0,0,0,0,0,0,0,1.33151354837103,0,0 | ||
|short_description=p@chr19:18901074..18901086,+ | |short_description=p@chr19:18901074..18901086,+ | ||
}} | }} |
Latest revision as of 05:22, 26 July 2015
Short description: | p@chr19:18901074..18901086, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18901074..18901086, + |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.84e-31 | 9 |
carbohydrate secreting cell | 2.84e-31 | 9 |
preadipocyte of the breast | 5.37e-25 | 3 |
adipocyte of omentum tissue | 1.31e-24 | 3 |
chondroblast | 1.78e-21 | 6 |
chondrocyte | 1.78e-21 | 6 |
fat cell | 1.10e-18 | 15 |
extracellular matrix secreting cell | 1.28e-18 | 15 |
adipocyte of breast | 3.67e-17 | 2 |
stromal cell | 2.96e-13 | 28 |
synovial cell | 1.59e-11 | 3 |
preadipocyte | 4.24e-11 | 12 |
secretory cell | 1.73e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
breast | 1.13e-28 | 10 |
chest | 4.92e-26 | 11 |
cavity lining | 1.48e-23 | 12 |
serous membrane | 1.48e-23 | 12 |
omentum | 9.90e-22 | 6 |
peritoneum | 9.90e-22 | 6 |
abdominal cavity | 9.90e-22 | 6 |
visceral peritoneum | 9.90e-22 | 6 |
stratified squamous epithelium | 1.59e-11 | 3 |
layer of synovial tissue | 1.59e-11 | 3 |
synovial joint | 1.59e-11 | 3 |
synovial membrane of synovial joint | 1.59e-11 | 3 |
mitral valve | 1.12e-09 | 1 |
vagina | 2.35e-09 | 1 |
subdivision of trunk | 6.79e-07 | 112 |
thoracic segment of trunk | 6.97e-07 | 52 |