FFCP PHASE1:Hg19::chr19:39898362..39898396,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39898362..39898396,+ | |||
|coexpression_cluster_id=C399 | |coexpression_cluster_id=C399 | ||
|description=CAGE_peak_at_chr19:39898362..39898396,+ | |description=CAGE_peak_at_chr19:39898362..39898396,+ | ||
Latest revision as of 07:36, 26 July 2015
| Short description: | p@chr19:39898362..39898396, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr19:39898362..39898396, + |
| Coexpression cluster: | C399_CD19_Eosinophils_CD4_CD8_CD14_Basophils_Natural |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr19:39898362..39898396+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 2.36e-33 | 136 |
| classical monocyte | 4.10e-30 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.10e-30 | 42 |
| defensive cell | 1.92e-26 | 48 |
| phagocyte | 1.92e-26 | 48 |
| myeloid leukocyte | 4.75e-26 | 72 |
| hematopoietic lineage restricted progenitor cell | 5.72e-24 | 120 |
| nongranular leukocyte | 8.73e-24 | 115 |
| granulocyte monocyte progenitor cell | 5.29e-21 | 67 |
| macrophage dendritic cell progenitor | 1.65e-20 | 61 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 5.07e-18 | 98 |
| blood island | 5.07e-18 | 98 |
| bone marrow | 5.35e-18 | 76 |
| hemolymphoid system | 5.00e-17 | 108 |
| bone element | 1.12e-16 | 82 |
| immune system | 1.76e-15 | 93 |
| skeletal element | 2.79e-15 | 90 |
| skeletal system | 1.59e-12 | 100 |
Showing 1 to 8 of 8 entries
