FFCP PHASE1:Hg19::chr1:12679031..12679040,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:12679031..12679040,-
|short_description=p@chr1:12679031..12679040,-
|description=CAGE_peak_at_chr1:12679031..12679040,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:12679031..12679040,- | |||
|description=CAGE_peak_at_chr1:12679031..12679040,- | |||
|id=chr1:12679031..12679040,- | |||
|ontology_enrichment_celltype=CL:0000222!9.71e-10!119;CL:0000183!4.93e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.59e-21;3!CL:0002581;1.65e-16;1!CL:0000737;2.09e-16;4!CL:0002595;2.94e-13;5!CL:0002188;4.12e-13;5!CL:1000746;1.24e-09;7!CL:1000612;1.24e-09;7!CL:0002593;4.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.76e-21,3;CL:0000513,1.76e-21,3;CL:0002581,2.25e-16,1;CL:0000737,2.26e-16,4;CL:0002595,2.68e-13,5;CL:0002188,5.27e-13,5;CL:1000746,1.47e-09,7;CL:1000612,1.47e-09,7;CL:0000222,2.05e-09,121;CL:0002593,4.34e-09,2;CL:0000187,5.30e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000513;1.59e-21;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.99e-10!118;UBERON:0007625!2.15e-09!11;UBERON:0002049!3.72e-09!79;UBERON:0007798!3.72e-09!79;UBERON:0000055!2.93e-08!69;UBERON:0005256!4.33e-08!143;UBERON:0000490!4.58e-08!138;UBERON:0004872!4.72e-08!84;UBERON:0001009!2.33e-07!113;UBERON:0002100!2.50e-07!216;UBERON:0001981!3.51e-07!60;UBERON:0007500!3.51e-07!60;UBERON:0004537!3.51e-07!60;UBERON:0006965!3.51e-07!60;UBERON:0004535!3.59e-07!110;UBERON:0001637!4.48e-07!42;UBERON:0003509!4.48e-07!42;UBERON:0004572!4.48e-07!42;UBERON:0003513!4.54e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.94e-13;5!UBERON:0001533;2.94e-13;5!UBERON:0003513;9.73e-10;7!UBERON:0000074;1.24e-09;7!UBERON:0001229;1.24e-09;7!UBERON:0002456;4.18e-09;2!UBERON:0005406;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.68e-13,5;UBERON:0001533,2.68e-13,5;UBERON:0003513,9.11e-10,7;UBERON:0010532,1.47e-09,7;UBERON:0000074,1.47e-09,7;UBERON:0001229,1.47e-09,7;UBERON:0001230,1.47e-09,7;UBERON:0003220,1.47e-09,7;UBERON:0005749,1.47e-09,7;UBERON:0004199,1.47e-09,7;UBERON:0004209,1.47e-09,7;UBERON:0004198,1.47e-09,7;UBERON:0007503,3.74e-09,78;UBERON:0002456,4.34e-09,2;UBERON:0005406,7.49e-09,2;UBERON:0005103,1.78e-08,8;UBERON:0000083,1.78e-08,8;UBERON:0009201,1.78e-08,8;UBERON:0006553,1.78e-08,8;UBERON:0003074,1.78e-08,8;UBERON:0003060,1.78e-08,8;UBERON:0000080,1.25e-07,9;UBERON:0002120,1.25e-07,9;UBERON:0004875,1.25e-07,9;UBERON:0005721,1.25e-07,9;UBERON:0005754,1.25e-07,9;UBERON:0007297,1.25e-07,9 | |||
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| ||
|short_description=p@chr1:12679031..12679040,- | |||
}} | }} |
Latest revision as of 20:31, 27 July 2015
Short description: | p@chr1:12679031..12679040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12679031..12679040, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.76e-21 | 3 |
cardiac muscle myoblast | 1.76e-21 | 3 |
perirenal preadipocyte | 2.25e-16 | 1 |
striated muscle cell | 2.26e-16 | 4 |
smooth muscle cell of the subclavian artery | 2.68e-13 | 5 |
glomerular endothelial cell | 5.27e-13 | 5 |
glomerular cell | 1.47e-09 | 7 |
kidney corpuscule cell | 1.47e-09 | 7 |
mesodermal cell | 2.05e-09 | 121 |
smooth muscle cell of the internal thoracic artery | 4.34e-09 | 2 |
muscle cell | 5.30e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.68e-13 | 5 |
subclavian artery | 2.68e-13 | 5 |
trunk blood vessel | 9.11e-10 | 7 |
primitive nephron | 1.47e-09 | 7 |
renal glomerulus | 1.47e-09 | 7 |
renal corpuscle | 1.47e-09 | 7 |
glomerular capsule | 1.47e-09 | 7 |
metanephric mesenchyme | 1.47e-09 | 7 |
glomerular tuft | 1.47e-09 | 7 |
S-shaped body | 1.47e-09 | 7 |
renal vesicle | 1.47e-09 | 7 |
comma-shaped body | 1.47e-09 | 7 |
epithelial vesicle | 3.74e-09 | 78 |
internal thoracic artery | 4.34e-09 | 2 |
perirenal fat | 7.49e-09 | 2 |
mesonephric epithelium | 1.78e-08 | 8 |
mesonephric tubule | 1.78e-08 | 8 |
nephric duct | 1.78e-08 | 8 |
renal duct | 1.78e-08 | 8 |
mesonephric duct | 1.78e-08 | 8 |
pronephric duct | 1.78e-08 | 8 |
mesonephros | 1.25e-07 | 9 |
pronephros | 1.25e-07 | 9 |
nephrogenic cord | 1.25e-07 | 9 |
pronephric mesoderm | 1.25e-07 | 9 |
rostral part of nephrogenic cord | 1.25e-07 | 9 |
presumptive pronephric mesoderm | 1.25e-07 | 9 |