FFCP PHASE1:Hg19::chr1:171519143..171519147,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:171519143..171519147,+ | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr1:171519143..171519147,+ | |description=CAGE_peak_at_chr1:171519143..171519147,+ | ||
|id=chr1:171519143..171519147,+ | |id=chr1:171519143..171519147,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.88e-16!140;CL:0002087!3.01e-16!119;CL:0000037!3.03e-15!172;CL:0000566!3.03e-15!172;CL:0002032!1.22e-14!165;CL:0000837!1.22e-14!165;CL:0000988!1.99e-14!182;CL:0002031!3.63e-14!124;CL:0002057!1.31e-09!42;CL:0000542!7.62e-09!53;CL:0000051!7.62e-09!53;CL:0000860!1.42e-08!45;CL:0000838!2.12e-08!52;CL:0002009!3.78e-07!65;CL:0002194!4.26e-07!63;CL:0000576!4.26e-07!63;CL:0000040!4.26e-07!63;CL:0000559!4.26e-07!63;CL:0000766!4.50e-07!76;CL:0000763!4.86e-07!112;CL:0000049!4.86e-07!112;CL:0000839!9.62e-07!70 | |ontology_enrichment_celltype=CL:0000738!1.88e-16!140;CL:0002087!3.01e-16!119;CL:0000037!3.03e-15!172;CL:0000566!3.03e-15!172;CL:0002032!1.22e-14!165;CL:0000837!1.22e-14!165;CL:0000988!1.99e-14!182;CL:0002031!3.63e-14!124;CL:0002057!1.31e-09!42;CL:0000542!7.62e-09!53;CL:0000051!7.62e-09!53;CL:0000860!1.42e-08!45;CL:0000838!2.12e-08!52;CL:0002009!3.78e-07!65;CL:0002194!4.26e-07!63;CL:0000576!4.26e-07!63;CL:0000040!4.26e-07!63;CL:0000559!4.26e-07!63;CL:0000766!4.50e-07!76;CL:0000763!4.86e-07!112;CL:0000049!4.86e-07!112;CL:0000839!9.62e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.30e-14;3!CL:0000791;5.54e-09;18!CL:0000789;5.54e-09;18!CL:0002419;5.54e-09;18!CL:0000084;2.56e-08;25!CL:0000542;6.23e-08;53!CL:0000624;9.87e-08;6!CL:0000775;5.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.98e-17,115;CL:0000738,1.08e-16,136;CL:0002031,1.08e-14,120;CL:0000623,1.19e-14,3;CL:0000825,1.19e-14,3;CL:0000838,1.74e-12,52;CL:0000037,2.16e-12,168;CL:0000542,3.39e-12,53;CL:0000051,3.39e-12,53;CL:0002032,6.54e-12,161;CL:0000837,6.54e-12,161;CL:0000988,1.83e-11,177;CL:0000791,5.37e-09,18;CL:0000789,5.37e-09,18;CL:0002420,5.37e-09,18;CL:0002419,5.37e-09,18;CL:0000790,5.37e-09,18;CL:0000084,2.93e-08,25;CL:0000827,2.93e-08,25;CL:0000624,8.54e-08,6;CL:0000775,3.93e-07,3;CL:0000860,4.69e-07,42;CL:0002057,4.69e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;5.54e-09;18!CL:0000051;6.23e-08;53 | |||
|ontology_enrichment_disease=DOID:162!1.90e-09!235;DOID:14566!4.03e-09!239;DOID:0050687!2.49e-07!143 | |ontology_enrichment_disease=DOID:162!1.90e-09!235;DOID:14566!4.03e-09!239;DOID:0050687!2.49e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.21e-07!102;UBERON:0003061!4.21e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!4.21e-07!102;UBERON:0003061!4.21e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0.251085279189606,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,0.553995408531877,1.80490002723128,2.17010870715852,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0.309706370895104,1.1507695692886,0.512321413058201,0.236482229888585,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,2.55734850319616,0.329851300186716,0.199463657621632,0.426224750532694,0.580418477257168,1.13477044938228,1.24564449799115,1.25624332628372,0,0.217188844705117,1.81619850790011,0.736555271975129,0.632924774881769,0.845021145247767,0,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,3.41527781465669,5.28513470433845,5.3518251937532,1.32171328579026,1.68152568894461,0,2.9506465517075,4.71612915298998,2.67281948699362,0.167186495390678,0,1.4203434172042,1.94826728407911,0,0.883817722424512,1.10766947291811,0,0.25618263945135,0.520237390239513,0.328875809207352,0,0.289803085735052,0.444859689486181,0.267540828089713,1.04535523804977,0.113309342697566,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0,0,2.21767417547206,3.7441627409691,2.02754165435919,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.327447688744282,0,0.370784442784429,0.649094787309367,0.174129737299267,0.132957960518865,2.14641561874808,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0.435758888184812,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,1.57624608161542,3.01878604803324,2.05348858047597,0,0,0,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.82707210449155,4.09856981555372,0.320182673410333,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.276242966807689,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0.106824071127473,0,0.735120647943095,0.743212700502875,0.144269212976445,0.426851060090485,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0.456469358066384,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.333698283423817,0.390776190804081,0,0,0,0.66614393599564,0,0.37428108081644,0,0,0.222886768554957,0,0,0,0,0,0.703347082052564,0.333926115068718,0.329607748453519,1.05562704063997,0.597743964753209,0.552567831062295,0.503865495708552,0.102268682502155,0.984678443688556,0,0.0898683511473268,0.537063524026827,0.511572370226872,0.197286811273867,0,0,1.93866549219044,0.185536196323703,0,0.520855522170466,0.174919999992391,0,0.227586896570999,0,0.236387681767936,1.72371686620732,0.291604613383254,1.04174996959975,0.885741385813839,0.844175070377856,0,0.331737779793674,0,0,0,0.278847488557207,0.384751292518985,0.341826167541004,0.46112780877612,0.179515288819544,0.108647371922008,0,0,0,1.02193298195737,0.31396051279005,0.664846727600626,0,0,0.167821586975843,0.75901493089674,0.476809736941136,0.421996129056054,0,0.424059214301822,0.216388639742091,0,0,0.611030144933625,0.593042257361244,0.370691816839509,0.313265848516366,0.067401132980677,0,0.234264445725339,0.547364367646998,0.391329237864179,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.261177619741208,0.17472666824203,0.171986032471617,0,0,0.164230914106418,0.193978032976839,0.264768380074501,0,0.411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| ||
|short_description=p@chr1:171519143..171519147,+ | |short_description=p@chr1:171519143..171519147,+ | ||
}} | }} |
Latest revision as of 00:21, 28 July 2015
Short description: | p@chr1:171519143..171519147, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171519143..171519147, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.98e-17 | 115 |
leukocyte | 1.08e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.08e-14 | 120 |
natural killer cell | 1.19e-14 | 3 |
pro-NK cell | 1.19e-14 | 3 |
lymphoid lineage restricted progenitor cell | 1.74e-12 | 52 |
hematopoietic stem cell | 2.16e-12 | 168 |
lymphocyte | 3.39e-12 | 53 |
common lymphoid progenitor | 3.39e-12 | 53 |
hematopoietic oligopotent progenitor cell | 6.54e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.54e-12 | 161 |
hematopoietic cell | 1.83e-11 | 177 |
mature alpha-beta T cell | 5.37e-09 | 18 |
alpha-beta T cell | 5.37e-09 | 18 |
immature T cell | 5.37e-09 | 18 |
mature T cell | 5.37e-09 | 18 |
immature alpha-beta T cell | 5.37e-09 | 18 |
T cell | 2.93e-08 | 25 |
pro-T cell | 2.93e-08 | 25 |
CD4-positive, alpha-beta T cell | 8.54e-08 | 6 |
neutrophil | 3.93e-07 | 3 |
classical monocyte | 4.69e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.69e-07 | 42 |