FFCP PHASE1:Hg19::chr1:172224417..172224440,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:172224417..172224440,+ to FFCP PHASE1:Hg19::chr1:172224417..172224440,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:172224417..172224440,+ | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_at_chr1:172224417..172224440,+ | |||
|id=chr1:172224417..172224440,+ | |||
|ontology_enrichment_celltype=CL:0000133!2.76e-11!59;CL:0000221!3.00e-11!71;CL:0002319!1.21e-10!25;CL:0000128!3.16e-10!7;CL:0000126!3.16e-10!7;CL:0000127!3.16e-10!7;CL:0002453!3.16e-10!7;CL:0002334!2.77e-08!12;CL:0000243!2.91e-08!15;CL:0000125!2.91e-08!15;CL:0000030!2.91e-08!15;CL:0000339!2.91e-08!15;CL:0000055!8.13e-08!180;CL:0000095!4.15e-07!17;CL:0000123!4.15e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.50e-14;3!CL:0000067;4.50e-14;3!CL:0005012;4.50e-14;3!CL:0002304;4.50e-14;3!CL:0002605;1.03e-13;3!CL:0002319;2.27e-13;25!CL:0002580;4.07e-13;3!CL:1000507;3.06e-10;10!CL:1000494;3.06e-10;10!CL:0000128;4.46e-10;7!CL:0000126;4.46e-10;7!CL:0000127;4.46e-10;7!CL:0000047;1.07e-09;2!CL:0000650;1.67e-09;2!CL:1000500;1.67e-09;2!CL:1000618;1.67e-09;2!CL:1001318;1.67e-09;2!CL:0002173;1.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.32e-14,3;CL:0000067,4.32e-14,3;CL:0005012,4.32e-14,3;CL:0002304,4.32e-14,3;CL:0002605,1.25e-13,3;CL:0002319,2.26e-13,25;CL:0002580,4.00e-13,3;CL:0000047,1.19e-12,8;CL:1000507,3.13e-10,10;CL:1000494,3.13e-10,10;CL:0000133,3.13e-10,59;CL:0000128,5.02e-10,7;CL:0000126,5.02e-10,7;CL:0000127,5.02e-10,7;CL:0002453,5.02e-10,7;CL:0000650,1.74e-09,2;CL:1000500,1.74e-09,2;CL:1000618,1.74e-09,2;CL:1001318,1.74e-09,2;CL:0002173,1.74e-09,2;CL:0000221,6.68e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000133;7.19e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.97e-08!11;UBERON:0000488!4.64e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.50e-14;3!UBERON:0001775;4.50e-14;3!UBERON:0000488;1.17e-10;4!UBERON:0004211;3.06e-10;10!UBERON:0009773;3.06e-10;10!UBERON:0001231;3.06e-10;10!UBERON:0004810;3.06e-10;10!UBERON:0003567;1.67e-09;2!UBERON:0003838;1.67e-09;2!UBERON:0003586;1.67e-09;2!UBERON:0005169;1.67e-09;2!UBERON:0002321;1.67e-09;2!UBERON:0005215;1.67e-09;2!UBERON:0002303;1.67e-09;2!UBERON:0002319;1.67e-09;2!UBERON:0007625;2.18e-09;11!UBERON:0002113;2.10e-07;24!UBERON:0011143;2.10e-07;24!UBERON:0001801;2.65e-07;14!UBERON:0002203;3.17e-07;6!UBERON:0001768;3.17e-07;6!UBERON:0002200;3.17e-07;6!UBERON:0000310;8.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.32e-14,3;UBERON:0001775,4.32e-14,3;UBERON:0000488,1.13e-10,4;UBERON:0004810,3.13e-10,10;UBERON:0003567,1.74e-09,2;UBERON:0003838,1.74e-09,2;UBERON:0003586,1.74e-09,2;UBERON:0005169,1.74e-09,2;UBERON:0002321,1.74e-09,2;UBERON:0005215,1.74e-09,2;UBERON:0002303,1.74e-09,2;UBERON:0002319,1.74e-09,2;UBERON:0007625,2.11e-09,11;UBERON:0001801,2.58e-07,14;UBERON:0002203,3.11e-07,6;UBERON:0001768,3.11e-07,6;UBERON:0002200,3.11e-07,6;UBERON:0000310,8.97e-07,10;UBERON:0002113,9.52e-07,26;UBERON:0003918,9.52e-07,26;UBERON:0011143,9.52e-07,26;UBERON:0005095,9.52e-07,26;UBERON:0007687,9.52e-07,26 | |||
|phase1_expression=2.54349730978779,0.642301571672949,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,5.15224776835902,3.01123735160345,7.15593045690376,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.664601683750863,0.812411591295047,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5595832996061,12.6525066278685,7.56278537312543,8.20398770611487,9.31048728347136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0,0,1.06400514659507,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,1.85653965465393,3.41029518064195,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,1.507095264676,1.29149563659404,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,1.43958489784653,0,0,0,0,0,1.29271715757778,0,0,2.92531928243358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,7.36874410245144,3.90419561572865,1.54657762555539,1.50764638800914,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.468565659970853,0,0,0,2.65690239414175,0.553107505625109,0,0,0,0,0,0,0,0,0,5.21026396419431,3.06923946576125,1.40330047216537,0.512556597022804,0.511707249066704,0.804269605718038,0,0.154209693802656,0.532685175939381,0,0,0.116210378459959,0,0,0,0,0,0,0.902399225814824,2.6185214615501,2.35304930753057,0,2.74434235121477,0,0,0.863663664408557,0,3.52230368807009,3.01013864312912,0.254876273045038,0,0,0,0,0,0.656029291399411,0.976135183992909,0,0,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,5.34192213880424,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,3.06806047506464,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,6.61059490761192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.824378340616761,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0,0,0.271808412147228,0.418411385249333,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,1.27134268827375,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24980407962107,1.06154382279153,0,0.235265819698172,0,0,0.298509605773748,1.40227985908335,0,0,0,0,0,0,0.310874401165561,0.591420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,4.46414416737631,3.03074539889327,0,0,0,0,0,0,0,1.4327107286519,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.785181748008205,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,1.5245859670942,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45771421354797,0.0636471582781649,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |phase1_expression=2.54349730978779,0.642301571672949,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,5.15224776835902,3.01123735160345,7.15593045690376,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.664601683750863,0.812411591295047,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5595832996061,12.6525066278685,7.56278537312543,8.20398770611487,9.31048728347136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0,0,1.06400514659507,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,1.85653965465393,3.41029518064195,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,1.507095264676,1.29149563659404,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,1.43958489784653,0,0,0,0,0,1.29271715757778,0,0,2.92531928243358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,7.36874410245144,3.90419561572865,1.54657762555539,1.50764638800914,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.468565659970853,0,0,0,2.65690239414175,0.553107505625109,0,0,0,0,0,0,0,0,0,5.21026396419431,3.06923946576125,1.40330047216537,0.512556597022804,0.511707249066704,0.804269605718038,0,0.154209693802656,0.532685175939381,0,0,0.116210378459959,0,0,0,0,0,0,0.902399225814824,2.6185214615501,2.35304930753057,0,2.74434235121477,0,0,0.863663664408557,0,3.52230368807009,3.01013864312912,0.254876273045038,0,0,0,0,0,0.656029291399411,0.976135183992909,0,0,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,5.34192213880424,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,3.06806047506464,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,6.61059490761192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.824378340616761,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0,0,0.271808412147228,0.418411385249333,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,1.27134268827375,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24980407962107,1.06154382279153,0,0.235265819698172,0,0,0.298509605773748,1.40227985908335,0,0,0,0,0,0,0.310874401165561,0.591420599958536,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,4.46414416737631,3.03074539889327,0,0,0,0,0,0,0,1.4327107286519,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.785181748008205,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,2.22934412268644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,1.5245859670942,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45771421354797,0.0636471582781649,0,0,0,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:172224417..172224440,+ | |||
}} | }} |
Latest revision as of 00:25, 28 July 2015
Short description: | p@chr1:172224417..172224440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:172224417..172224440, + |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.32e-14 | 3 |
ciliated epithelial cell | 4.32e-14 | 3 |
multi-ciliated epithelial cell | 4.32e-14 | 3 |
non-pigmented ciliary epithelial cell | 4.32e-14 | 3 |
astrocyte of the cerebral cortex | 1.25e-13 | 3 |
neural cell | 2.26e-13 | 25 |
preadipocyte of the breast | 4.00e-13 | 3 |
neuronal stem cell | 1.19e-12 | 8 |
kidney tubule cell | 3.13e-10 | 10 |
nephron tubule epithelial cell | 3.13e-10 | 10 |
neurectodermal cell | 3.13e-10 | 59 |
oligodendrocyte | 5.02e-10 | 7 |
macroglial cell | 5.02e-10 | 7 |
astrocyte | 5.02e-10 | 7 |
oligodendrocyte precursor cell | 5.02e-10 | 7 |
mesangial cell | 1.74e-09 | 2 |
kidney interstitial cell | 1.74e-09 | 2 |
juxtaglomerular complex cell | 1.74e-09 | 2 |
renal interstitial pericyte | 1.74e-09 | 2 |
extraglomerular mesangial cell | 1.74e-09 | 2 |
ectodermal cell | 6.68e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.32e-14 | 3 |
ciliary body | 4.32e-14 | 3 |
atypical epithelium | 1.13e-10 | 4 |
nephron tubule epithelium | 3.13e-10 | 10 |
abdomen connective tissue | 1.74e-09 | 2 |
abdominal segment connective tissue | 1.74e-09 | 2 |
trunk connective tissue | 1.74e-09 | 2 |
interstitial tissue | 1.74e-09 | 2 |
extraglomerular mesangium | 1.74e-09 | 2 |
kidney interstitium | 1.74e-09 | 2 |
juxtaglomerular apparatus | 1.74e-09 | 2 |
mesangium | 1.74e-09 | 2 |
pigment epithelium of eye | 2.11e-09 | 11 |
anterior segment of eyeball | 2.58e-07 | 14 |
vasculature of eye | 3.11e-07 | 6 |
uvea | 3.11e-07 | 6 |
vasculature of head | 3.11e-07 | 6 |
breast | 8.97e-07 | 10 |
kidney | 9.52e-07 | 26 |
kidney mesenchyme | 9.52e-07 | 26 |
upper urinary tract | 9.52e-07 | 26 |
kidney rudiment | 9.52e-07 | 26 |
kidney field | 9.52e-07 | 26 |