FFCP PHASE1:Hg19::chr1:198567966..198567999,-: Difference between revisions
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|id=chr1:198567966..198567999,-
|short_description=p1@ENST00000429469
|description=CAGE_peak_1_at_ENST00000429469_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000429469_5end | |||
|cluster_id=chr1:198567966..198567999,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000429469_5end | |||
|id=chr1:198567966..198567999,- | |||
|ontology_enrichment_celltype=CL:0000945!3.20e-42!24;CL:0000826!3.20e-42!24;CL:0000236!7.05e-31!14;CL:0000542!8.77e-30!53;CL:0000051!8.77e-30!53;CL:0000838!3.87e-28!52;CL:0000037!2.44e-17!172;CL:0000566!2.44e-17!172;CL:0002032!7.68e-16!165;CL:0000837!7.68e-16!165;CL:0000988!1.20e-15!182;CL:0002087!2.62e-14!119;CL:0000738!3.87e-13!140;CL:0002031!7.81e-10!124;CL:0000817!1.82e-07!3;CL:0000239!2.25e-07!3;CL:1000615!2.25e-07!3;CL:0002306!2.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.98e-76;24!CL:0000236;9.41e-68;13!CL:0000542;2.69e-25;53!CL:0000239;2.11e-15;3!CL:1000615;2.11e-15;3!CL:0002306;2.11e-15;3!CL:0000817;9.93e-07;1!CL:0000785;9.93e-07;1!CL:0000819;9.93e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.75e-76,24;CL:0000826,5.75e-76,24;CL:0000236,1.05e-62,14;CL:0000542,9.31e-36,53;CL:0000051,9.31e-36,53;CL:0000838,9.98e-33,52;CL:0002032,1.64e-16,161;CL:0000837,1.64e-16,161;CL:0000037,1.37e-15,168;CL:0000239,2.34e-15,3;CL:1000615,2.34e-15,3;CL:0002306,2.34e-15,3;CL:0000988,1.63e-14,177;CL:0002087,7.17e-14,115;CL:0002031,1.28e-11,120;CL:0000738,4.59e-11,136;CL:0000817,3.81e-08,3;CL:0000819,9.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.69e-25;53 | |||
|ontology_enrichment_disease=DOID:2531!2.01e-09!51;DOID:0060083!2.01e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.09e-12;10!DOID:2531;7.80e-08;51!DOID:0060083;7.80e-08;51!DOID:12603;9.15e-07;1!DOID:0060073;9.93e-07;1!DOID:8675;9.93e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.26e-14,51;DOID:0060083,1.26e-14,51;DOID:0060058,1.01e-12,10;DOID:1240,1.69e-07,39;DOID:12603,9.15e-07,1;DOID:0060073,9.67e-07,1;DOID:8675,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.68e-12!15;UBERON:0000179!9.68e-12!15;UBERON:0000463!9.68e-12!15;UBERON:0004177!1.96e-09!7;UBERON:0006853!2.25e-07!3;UBERON:0007685!2.25e-07!3;UBERON:0004134!2.25e-07!3;UBERON:0002106!8.22e-07!3;UBERON:0004854!8.22e-07!3;UBERON:0009034!8.22e-07!3;UBERON:0002095!8.22e-07!3;UBERON:0004782!8.22e-07!3;UBERON:0003281!8.22e-07!3;UBERON:0009664!8.22e-07!3;UBERON:0002296!8.22e-07!3;UBERON:0005602!8.22e-07!3;UBERON:0001179!8.22e-07!3;UBERON:0006293!8.22e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.11e-15;3!UBERON:0007685;2.11e-15;3!UBERON:0004134;2.11e-15;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.34e-15,3;UBERON:0007685,2.34e-15,3;UBERON:0004134,2.34e-15,3 | |||
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| ||
|short_description=p1@ENST00000429469 | |||
}} | }} |
Latest revision as of 01:54, 28 July 2015
Short description: | p1@ENST00000429469 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000429469_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000429469_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.75e-76 | 24 |
pro-B cell | 5.75e-76 | 24 |
B cell | 1.05e-62 | 14 |
lymphocyte | 9.31e-36 | 53 |
common lymphoid progenitor | 9.31e-36 | 53 |
lymphoid lineage restricted progenitor cell | 9.98e-33 | 52 |
hematopoietic oligopotent progenitor cell | 1.64e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-16 | 161 |
hematopoietic stem cell | 1.37e-15 | 168 |
brush border epithelial cell | 2.34e-15 | 3 |
kidney cortex tubule cell | 2.34e-15 | 3 |
epithelial cell of proximal tubule | 2.34e-15 | 3 |
hematopoietic cell | 1.63e-14 | 177 |
nongranular leukocyte | 7.17e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-11 | 120 |
leukocyte | 4.59e-11 | 136 |
precursor B cell | 3.81e-08 | 3 |
B-1 B cell | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.34e-15 | 3 |
region of nephron tubule | 2.34e-15 | 3 |
proximal tubule | 2.34e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.26e-14 | 51 |
immune system cancer | 1.26e-14 | 51 |
lymphoma | 1.01e-12 | 10 |
leukemia | 1.69e-07 | 39 |
acute leukemia | 9.15e-07 | 1 |
lymphatic system cancer | 9.67e-07 | 1 |
lymphosarcoma | 9.67e-07 | 1 |