FFCP PHASE1:Hg19::chr1:42344353..42344360,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:42344353..42344360,+
|short_description=p@chr1:42344353..42344360,+
|description=CAGE_peak_at_chr1:42344353..42344360,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:42344353..42344360,+ | |||
|description=CAGE_peak_at_chr1:42344353..42344360,+ | |||
|id=chr1:42344353..42344360,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.94e-09;7!CL:0000586;8.94e-09;7!CL:1001319;1.00e-07;1!CL:1000600;1.00e-07;1!CL:0000083;1.72e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.94e-09,7;CL:0000586,7.94e-09,7;CL:1001319,8.51e-08,1;CL:1000600,8.51e-08,1;CL:0000083,1.49e-07,4;CL:0000076,7.17e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.91e-29!143;DOID:14566!6.59e-26!239;DOID:162!1.55e-25!235;DOID:305!3.21e-23!106;DOID:1749!2.99e-08!14;DOID:0050686!1.57e-07!137;DOID:170!6.73e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.09e-11;14!DOID:1799;1.00e-07;1!DOID:0050619;1.00e-07;1!DOID:10165;1.00e-07;1!DOID:3151;1.00e-07;1!DOID:1357;1.00e-07;1!DOID:3112;1.00e-07;1!DOID:1798;1.00e-07;1!DOID:3149;1.00e-07;1!DOID:1793;1.72e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.34e-16,143;DOID:162,4.21e-15,235;DOID:14566,1.10e-14,239;DOID:1749,1.62e-11,14;DOID:305,2.74e-09,106;DOID:1799,7.45e-08,1;DOID:10165,7.45e-08,1;DOID:1798,7.45e-08,1;DOID:3112,1.18e-07,1;DOID:0050619,1.35e-07,1;DOID:1357,1.35e-07,1;DOID:1793,1.49e-07,4;DOID:3151,1.87e-07,1;DOID:3149,1.87e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001264!3.67e-07!10;UBERON:0003922!3.67e-07!10;UBERON:0003923!3.67e-07!10;UBERON:0003924!3.67e-07!10;UBERON:0003921!3.67e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.70e-15;4!UBERON:0004785;5.70e-15;4!UBERON:0001264;9.81e-11;10!UBERON:0000974;3.71e-10;6!UBERON:0002075;6.45e-09;18!UBERON:0004645;1.00e-07;1!UBERON:0001764;1.00e-07;1!UBERON:0001825;1.00e-07;1!UBERON:0001256;1.00e-07;1!UBERON:0001259;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.22e-15,4;UBERON:0004785,2.22e-15,4;UBERON:0001264,7.16e-11,10;UBERON:0002075,5.00e-09,18;UBERON:0004645,8.51e-08,1;UBERON:0001256,8.51e-08,1;UBERON:0001259,8.51e-08,1;UBERON:0001764,1.35e-07,1;UBERON:0001825,1.35e-07,1 | |||
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|short_description=p@chr1:42344353..42344360,+ | |||
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Latest revision as of 08:18, 28 July 2015
Short description: | p@chr1:42344353..42344360, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:42344353..42344360, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.94e-09 | 7 |
germ cell | 7.94e-09 | 7 |
bladder cell | 8.51e-08 | 1 |
lower urinary tract cell | 8.51e-08 | 1 |
epithelial cell of pancreas | 1.49e-07 | 4 |
squamous epithelial cell | 7.17e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.22e-15 | 4 |
respiratory system mucosa | 2.22e-15 | 4 |
pancreas | 7.16e-11 | 10 |
viscus | 5.00e-09 | 18 |
urinary bladder urothelium | 8.51e-08 | 1 |
wall of urinary bladder | 8.51e-08 | 1 |
mucosa of urinary bladder | 8.51e-08 | 1 |
maxillary sinus | 1.35e-07 | 1 |
paranasal sinus | 1.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.34e-16 | 143 |
cancer | 4.21e-15 | 235 |
disease of cellular proliferation | 1.10e-14 | 239 |
squamous cell carcinoma | 1.62e-11 | 14 |
carcinoma | 2.74e-09 | 106 |
islet cell tumor | 7.45e-08 | 1 |
endocrine pancreas cancer | 7.45e-08 | 1 |
pancreatic endocrine carcinoma | 7.45e-08 | 1 |
papillary adenocarcinoma | 1.18e-07 | 1 |
paranasal sinus cancer | 1.35e-07 | 1 |
maxillary sinus cancer | 1.35e-07 | 1 |
pancreatic cancer | 1.49e-07 | 4 |
skin squamous cell carcinoma | 1.87e-07 | 1 |
keratoacanthoma | 1.87e-07 | 1 |