FFCP PHASE1:Hg19::chr20:19982026..19982040,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:19982026..19982040,+ | |||
|coexpression_cluster_id=C1258 | |||
|description=CAGE_peak_at_chr20:19982026..19982040,+ | |||
|id=chr20:19982026..19982040,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.68e-14!42;CL:0002194!1.25e-12!63;CL:0000576!1.25e-12!63;CL:0000040!1.25e-12!63;CL:0000559!1.25e-12!63;CL:0000860!2.58e-12!45;CL:0002009!1.29e-11!65;CL:0000839!6.45e-09!70;CL:0000557!1.06e-08!71;CL:0000076!5.06e-08!62;CL:0000222!5.95e-08!119;CL:0000066!1.73e-07!254;CL:0000766!4.98e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.93e-14;39!CL:0000234;3.93e-14;39!CL:0000860;7.55e-14;33!CL:0002057;7.55e-14;33!CL:0000576;1.85e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.80e-17,48;CL:0000234,5.80e-17,48;CL:0002194,4.84e-14,59;CL:0000576,4.84e-14,59;CL:0000040,4.84e-14,59;CL:0000559,4.84e-14,59;CL:0000860,6.64e-14,42;CL:0002057,6.64e-14,42;CL:0002009,8.25e-13,61;CL:0000839,1.17e-09,66;CL:0000557,2.65e-09,67;CL:0000076,4.74e-08,63;CL:0000222,5.06e-08,121;CL:0000766,1.09e-07,72;CL:0000066,6.28e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!3.30e-22!625;UBERON:0000480!5.72e-22!626;UBERON:0000468!8.48e-22!659;UBERON:0002050!2.52e-18!605;UBERON:0005423!2.52e-18!605;UBERON:0000923!3.50e-18!604;UBERON:0005291!3.50e-18!604;UBERON:0006598!3.50e-18!604;UBERON:0002532!3.50e-18!604;UBERON:0000062!6.59e-18!511;UBERON:0000922!3.20e-17!612;UBERON:0000926!2.53e-16!448;UBERON:0004120!2.53e-16!448;UBERON:0006603!2.53e-16!448;UBERON:0002204!1.25e-11!167;UBERON:0004765!9.56e-09!101;UBERON:0001434!9.56e-09!101;UBERON:0002371!1.62e-07!80;UBERON:0001474!4.06e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.90e-15,564;UBERON:0005423,9.06e-15,581;UBERON:0000922,2.39e-14,592;UBERON:0000923,3.05e-14,560;UBERON:0010316,3.05e-14,560;UBERON:0005291,3.05e-14,560;UBERON:0006598,3.05e-14,560;UBERON:0010317,3.05e-14,560;UBERON:0002532,3.05e-14,560;UBERON:0000926,6.84e-13,315;UBERON:0004120,6.84e-13,315;UBERON:0006603,6.84e-13,315;UBERON:0002204,1.37e-12,167;UBERON:0004765,4.43e-10,90;UBERON:0001434,4.68e-10,100;UBERON:0002371,7.25e-08,76;UBERON:0001474,2.50e-07,82;UBERON:0003102,7.25e-07,99 | |||
|phase1_expression=13.9892352038329,5.1384125733836,7.47058341708647,12.0087958023756,4.46961094427288,18.3191090061077,2.53299878168311,4.42203911398782,3.13422753839806,3.68600904752263,0,2.83973783769224,2.11013582582763,19.1837847088072,13.9186897805725,82.6959930135684,71.7206488348533,56.2338769598277,75.6295838125286,5.29420549730188,2.85600967741954,11.2843699732112,1.14494394852423,0.547497700291537,0.376627918784408,0,0,0,2.75354993794233,3.83829398097213,3.09632246632152,2.75826367343678,1.50602959389125,4.06729411183466,0,0,0.293600439334847,7.20194031091441,7.01905566145496,4.55722828503289,25.0785331148715,12.6318529747402,10.8181738406358,21.5189393393756,13.6035339727971,12.1292030593908,33.7022103513243,17.6802191849385,16.7241440283356,15.247696793074,11.0149103807513,14.8983804829809,75.1545584005828,29.692295444856,43.3364757101894,18.2595069356327,7.64137220161968,11.0114507378091,89.3764965723036,17.3301674621091,56.9010041961147,7.58657990429447,12.1672831149195,8.95071976118658,249.579945220582,49.3625145481292,82.8353591164115,17.0849092374585,18.7733850631273,8.90474263290978,209.468227911146,48.9809255863461,108.546598892223,3.80259515361495,3.4016687994407,5.45112478321777,5.95341745076424,6.60778328502628,3.53596290733576,6.27028036230747,5.37075028437543,5.11459630540975,0,0,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0,0,0,0,4.48406850385229,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0,0,0,0,6.03630773733273,4.34732710268003,3.61439152384566,3.50936537445123,9.84956328933601,0,3.89307896242109,7.27918092163323,5.09977614163897,3.33772185633879,3.47094550068939,3.64295288292542,10.7527488407485,6.16640047943898,2.96020553408754,9.1740992758017,0.476981248610684,0,0,5.96287222100115,1.72046919021225,6.2485290289367,3.39184765154406,1.67799774483962,5.22724279686128,4.17989933073621,12.4040044401278,5.69226020298736,2.67776490211736,11.6820501961653,18.2465305372443,20.7452748915944,9.19157700864672,29.9752520716251,6.96537880615822,1.57170560838319,0.900891843866578,0,2.84779697870439,4.76324534219059,0,0,1.3082821564276,18.8849341644221,22.286970052966,1.32409180813219,2.58152958673932,3.90135220418193,3.92474320099615,4.2699598291882,10.853372130355,2.17847724779836,7.54379763590253,5.39424280274414,9.68687536927561,6.33793516927999,0,13.1107232268735,6.27519003698894,8.66802347200446,1.05691048779388,2.42809416552197,3.23036855415172,8.16616685019573,4.54486974053541,4.33968280938215,13.0680314301026,10.6324779589779,0,2.87447256726495,2.35670559535693,1.25118519871964,3.04770527032601,3.5118209670467,15.63087758575,8.26309323986282,9.64173556860179,4.30535125653269,4.27114777637135,8.9011398487016,3.30100205692843,6.90451945897541,2.83404594050192,5.58350568994769,8.27004027982204,6.62571635096151,2.27190396819703,6.16734320903406,7.59736467048416,4.61512470271599,3.82857973265033,5.08681776931463,19.3260853163297,8.18238361772504,16.0610573417842,0,0,0.580969714347592,0,0,0.72995471815166,3.12899064659632,28.302601280487,1.38134921352481,12.0735661288315,7.21879481669586,6.98010120235079,5.22612539242115,6.26628677697053,6.17646247301406,6.75426276686459,5.93176547777742,7.01122802432855,3.33576490713088,3.46272441251751,22.1446636387394,7.01208869017229,2.8810180793198,0,2.53510069643662,0,2.36315962672562,0,6.51838724278502,6.34800898104545,13.6090353906696,5.62008766288098,6.03173834469785,6.29601427078001,0.325808305310325,2.07986957055916,8.6598805215164,6.26024186865415,2.81780866165972,10.9718500298416,22.6862901162539,15.4105863310025,0,0,30.7771257609247,10.7641961964049,13.5254357682743,32.8068418953719,28.8929260502038,10.9166824876638,12.985985791913,14.2410629871841,5.36735750831296,0.492663237895943,0,0.414656231081544,0.864719720501769,1.51490920111656,0.571481048629521,0.381988425558278,0,6.84289784090821,0.719792448923265,0.600686115687835,0,5.7186853016134,2.1798003441664,8.2138880119464,9.04902010304444,3.57656445851882,8.45302752556,11.7012771297343,11.4408180602503,1.54324424557285,4.25547396069835,2.39779961114489,11.58121748631,1.62786481617433,0,7.16619605446217,11.727934308504,1.58390374586686,19.5935595088731,11.3299349618038,10.597137065298,42.5683232244167,25.6151116630384,82.2252363983823,5.27174682081482,1.14861935834114,0,6.9495027200438,3.08214483825575,6.26713371339634,0,0.197030760201927,0,0,1.27047312111232,0,2.31986643833309,3.68535783735567,3.18969375826582,0,0,0,26.0105962444577,17.005797716029,18.7172866352818,9.35868876888632,7.67244651827796,8.83133524190034,3.5142424497814,5.41702979509894,2.27407504055985,3.10419213877515,6.64225598535437,0.921845842708516,4.69171518127647,2.74121620447837,1.71571711905428,0.413536052245775,1.94142780736755,0.106727557803444,2.72814814301633,1.66435439510497,2.72151263996712,6.4508030032882,4.75732117192994,3.64858122762996,8.71346214938766,7.16390148693385,8.68611174175481,2.9683613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| |||
|short_description=p@chr20:19982026..19982040,+ | |||
}} |
Latest revision as of 12:19, 28 July 2015
Short description: | p@chr20:19982026..19982040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:19982026..19982040, + |
Coexpression cluster: | C1258_CD14_Monocytederived_Aortic_Olfactory_spinal_occipital_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.80e-17 | 48 |
phagocyte | 5.80e-17 | 48 |
monopoietic cell | 4.84e-14 | 59 |
monocyte | 4.84e-14 | 59 |
monoblast | 4.84e-14 | 59 |
promonocyte | 4.84e-14 | 59 |
classical monocyte | 6.64e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.64e-14 | 42 |
macrophage dendritic cell progenitor | 8.25e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.17e-09 | 66 |
granulocyte monocyte progenitor cell | 2.65e-09 | 67 |
squamous epithelial cell | 4.74e-08 | 63 |
mesodermal cell | 5.06e-08 | 121 |
myeloid leukocyte | 1.09e-07 | 72 |
epithelial cell | 6.28e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.90e-15 | 564 |
developing anatomical structure | 9.06e-15 | 581 |
embryo | 2.39e-14 | 592 |
germ layer | 3.05e-14 | 560 |
germ layer / neural crest | 3.05e-14 | 560 |
embryonic tissue | 3.05e-14 | 560 |
presumptive structure | 3.05e-14 | 560 |
germ layer / neural crest derived structure | 3.05e-14 | 560 |
epiblast (generic) | 3.05e-14 | 560 |
mesoderm | 6.84e-13 | 315 |
mesoderm-derived structure | 6.84e-13 | 315 |
presumptive mesoderm | 6.84e-13 | 315 |
musculoskeletal system | 1.37e-12 | 167 |
skeletal element | 4.43e-10 | 90 |
skeletal system | 4.68e-10 | 100 |
bone marrow | 7.25e-08 | 76 |
bone element | 2.50e-07 | 82 |
surface structure | 7.25e-07 | 99 |