FFCP PHASE1:Hg19::chr20:31612754..31612763,+: Difference between revisions
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|id=chr20:31612754..31612763,+
|short_description=p@chr20:31612754..31612763,+
|description=CAGE_peak_at_chr20:31612754..31612763,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:31612754..31612763,+ | |||
|coexpression_cluster_id=C2613 | |||
|description=CAGE_peak_at_chr20:31612754..31612763,+ | |||
|id=chr20:31612754..31612763,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.38e-09!12;CL:0000417!1.38e-09!12;CL:0000668!1.38e-09!12;CL:0000414!1.38e-09!12;CL:0000412!1.38e-09!12;CL:0000182!1.38e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0002327;8.69e-18;4!CL:0000182;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.39e-66;1!UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:178!6.82e-13!1;DOID:326!6.82e-13!1;DOID:3978!6.82e-13!1;DOID:3394!6.82e-13!1;DOID:5844!6.82e-13!1;DOID:7!1.42e-07!39;DOID:114!4.42e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.69e-18;4!DOID:1612;8.69e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:7,6.83e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.34e-24!2;UBERON:0001723!1.17e-16!3;UBERON:0001033!1.17e-16!3;UBERON:0010056!1.17e-16!3;UBERON:0002372!1.82e-13!1;UBERON:0001961!1.82e-13!1;UBERON:0001744!1.82e-13!1;UBERON:0001735!1.82e-13!1;UBERON:0001042!2.74e-11!10;UBERON:0009145!2.74e-11!10;UBERON:0000078!8.76e-11!18;UBERON:0006562!2.59e-10!11;UBERON:0002365!1.37e-09!31;UBERON:0002330!1.37e-09!31;UBERON:0000166!2.84e-09!21;UBERON:0001041!1.03e-08!98;UBERON:0003126!1.25e-07!7;UBERON:0001005!1.25e-07!7;UBERON:0000007!4.17e-07!2;UBERON:0000165!5.35e-07!28;UBERON:0000930!5.35e-07!28;UBERON:0002530!6.73e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.39e-66;1!UBERON:0001961;2.39e-66;1!UBERON:0001744;2.39e-66;1!UBERON:0001042;2.39e-66;1!UBERON:0001735;2.39e-66;1!UBERON:0006562;5.04e-34;2!UBERON:0001911;8.69e-18;4!UBERON:0002365;6.23e-10;31!UBERON:0002330;6.23e-10;31!UBERON:0000310;6.13e-08;10!UBERON:0002465;6.13e-08;10!UBERON:0001443;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.39e-66,1;UBERON:0001961,2.39e-66,1;UBERON:0001744,2.39e-66,1;UBERON:0001735,2.39e-66,1;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0002365,1.20e-09,31;UBERON:0002330,1.20e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0000310,5.73e-08,10;UBERON:0002465,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0001443,2.32e-07,11;UBERON:0006562,2.47e-07,11 | |||
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|short_description=p@chr20:31612754..31612763,+ | |||
}} | }} |
Latest revision as of 13:04, 28 July 2015
Short description: | p@chr20:31612754..31612763, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:31612754..31612763, + |
Coexpression cluster: | C2613_tonsil_trachea_salivary_hepatocellular_throat_tongue_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.39e-66 | 1 |
mucosa-associated lymphoid tissue | 2.39e-66 | 1 |
lymphoid tissue | 2.39e-66 | 1 |
tonsillar ring | 2.39e-66 | 1 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
exocrine gland | 1.20e-09 | 31 |
exocrine system | 1.20e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
breast | 5.73e-08 | 10 |
lymphoid system | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
chest | 2.32e-07 | 11 |
pharynx | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |
disease of anatomical entity | 6.83e-08 | 39 |