FFCP PHASE1:Hg19::chr2:173092815..173092822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:173092815..173092822,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_at_chr2:173092815..173092822,+ | |||
|id=chr2:173092815..173092822,+ | |||
|ontology_enrichment_celltype=CL:0002251!3.13e-09!21;CL:0002076!2.21e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.12e-09;1!CL:0001024;1.12e-09;1!CL:0002032;1.83e-09;1!CL:0000557;1.83e-09;1!CL:1001319;2.35e-09;1!CL:1000600;2.35e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.12e-09,1;CL:1001319,1.99e-09,1;CL:1000600,1.99e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;7.97e-10;1 | |||
|ontology_enrichment_disease=DOID:1749!2.40e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.37e-14;14!DOID:9119;1.62e-09;1!DOID:1799;4.15e-09;1!DOID:10165;4.15e-09;1!DOID:3151;4.15e-09;1!DOID:1798;4.15e-09;1!DOID:3149;4.15e-09;1!DOID:225;4.15e-09;1!DOID:8692;1.58e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.25e-14,14;DOID:9119,1.56e-09,1;DOID:3151,4.15e-09,1;DOID:3149,4.15e-09,1;DOID:225,4.50e-09,1;DOID:1799,5.28e-09,1;DOID:10165,5.28e-09,1;DOID:1798,5.28e-09,1;DOID:8692,5.31e-09,31;DOID:1240,4.76e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.03e-14!4;UBERON:0004785!3.03e-14!4;UBERON:0006947!3.75e-12!3;UBERON:0004054!3.75e-12!3;UBERON:0000974!9.85e-12!10;UBERON:0003729!2.06e-11!5;UBERON:0005904!3.28e-09!4;UBERON:0001255!2.24e-08!2;UBERON:0001556!2.24e-08!2;UBERON:0000161!3.34e-08!35;UBERON:0000344!3.49e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.13e-12;3!UBERON:0004054;3.13e-12;3!UBERON:0000998;7.97e-10;1!UBERON:0006868;7.97e-10;1!UBERON:0001000;8.67e-10;1!UBERON:0005352;8.67e-10;1!UBERON:0000997;1.32e-09;1!UBERON:0005056;1.32e-09;1!UBERON:0004176;1.32e-09;1!UBERON:0005904;2.17e-09;4!UBERON:0004645;2.35e-09;1!UBERON:0001256;2.35e-09;1!UBERON:0001259;2.35e-09;1!UBERON:0000996;4.15e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.13e-12,3;UBERON:0004054,3.13e-12,3;UBERON:0000998,7.98e-10,1;UBERON:0006868,7.98e-10,1;UBERON:0001000,8.68e-10,1;UBERON:0005352,8.68e-10,1;UBERON:0000997,1.32e-09,1;UBERON:0005056,1.32e-09,1;UBERON:0004645,1.99e-09,1;UBERON:0001256,1.99e-09,1;UBERON:0001259,1.99e-09,1;UBERON:0005904,2.17e-09,4;UBERON:0000996,3.00e-09,1 | |||
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| ||
|short_description=p@chr2:173092815..173092822,+ | |||
}} | }} |
Latest revision as of 02:29, 29 July 2015
Short description: | p@chr2:173092815..173092822, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:173092815..173092822, + |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.12e-09 | 1 |
bladder cell | 1.99e-09 | 1 |
lower urinary tract cell | 1.99e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.13e-12 | 3 |
internal male genitalia | 3.13e-12 | 3 |
seminal vesicle | 7.98e-10 | 1 |
seminal fluid secreting gland | 7.98e-10 | 1 |
vas deferens | 8.68e-10 | 1 |
spermatic cord | 8.68e-10 | 1 |
mammalian vulva | 1.32e-09 | 1 |
external female genitalia | 1.32e-09 | 1 |
urinary bladder urothelium | 1.99e-09 | 1 |
wall of urinary bladder | 1.99e-09 | 1 |
mucosa of urinary bladder | 1.99e-09 | 1 |
duct of male reproductive system | 2.17e-09 | 4 |
vagina | 3.00e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.25e-14 | 14 |
acute myeloid leukemia | 1.56e-09 | 1 |
skin squamous cell carcinoma | 4.15e-09 | 1 |
keratoacanthoma | 4.15e-09 | 1 |
syndrome | 4.50e-09 | 1 |
islet cell tumor | 5.28e-09 | 1 |
endocrine pancreas cancer | 5.28e-09 | 1 |
pancreatic endocrine carcinoma | 5.28e-09 | 1 |
myeloid leukemia | 5.31e-09 | 31 |
leukemia | 4.76e-07 | 39 |