FFCP PHASE1:Hg19::chr2:191709136..191709144,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:191709136..191709144,- | |||
|coexpression_cluster_id=C601 | |coexpression_cluster_id=C601 | ||
|description=CAGE_peak_at_chr2:191709136..191709144,- | |description=CAGE_peak_at_chr2:191709136..191709144,- |
Latest revision as of 04:25, 29 July 2015
Short description: | p@chr2:191709136..191709144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:191709136..191709144, - |
Coexpression cluster: | C601_endometrial_clear_thyroid_kidney_Renal_serous_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr2:191709136..191709144- |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.88e-23 | 6 |
stromal cell of endometrium | 3.88e-23 | 6 |
pneumocyte | 2.89e-12 | 3 |
amnion mesenchymal stem cell | 6.55e-08 | 5 |
Langerhans cell | 7.49e-08 | 5 |
endo-epithelial cell | 7.58e-08 | 42 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.07e-17 | 2 |
alveolar duct | 1.07e-17 | 2 |
bronchiole | 1.07e-17 | 2 |
pulmonary alveolus epithelium | 2.89e-12 | 3 |
alveolus | 2.89e-12 | 3 |
pulmonary lobule | 2.89e-12 | 3 |
lobule | 2.89e-12 | 3 |
alveolus of lung | 2.89e-12 | 3 |
alveolar system | 2.89e-12 | 3 |
pulmonary acinus | 2.89e-12 | 3 |
Showing 1 to 10 of 15 entries
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.88e-23 | 6 |
lung adenocarcinoma | 1.07e-17 | 2 |
non-small cell lung carcinoma | 7.01e-08 | 5 |
Showing 1 to 3 of 3 entries