FFCP PHASE1:Hg19::chr2:42448566..42448570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:42448566..42448570,+ | |||
|coexpression_cluster_id=C2051 | |||
|description=CAGE_peak_at_chr2:42448566..42448570,+ | |||
|id=chr2:42448566..42448570,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.52e-16!140;CL:0002087!3.30e-15!119;CL:0002031!1.78e-13!124;CL:0000037!1.82e-10!172;CL:0000566!1.82e-10!172;CL:0002057!7.49e-10!42;CL:0002032!5.31e-09!165;CL:0000837!5.31e-09!165;CL:0000988!1.56e-08!182;CL:0000860!1.73e-08!45;CL:0000838!2.97e-08!52;CL:0000542!6.85e-08!53;CL:0000051!6.85e-08!53;CL:0002009!2.36e-07!65;CL:0000766!2.53e-07!76;CL:0000791!5.30e-07!18;CL:0000789!5.30e-07!18;CL:0002420!5.30e-07!18;CL:0002419!5.30e-07!18;CL:0000790!5.30e-07!18;CL:0000624!8.81e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.19e-22;6!CL:0000791;1.65e-15;18!CL:0000789;1.65e-15;18!CL:0002419;1.65e-15;18!CL:0000623;5.38e-12;3!CL:0000226;9.32e-12;3!CL:0000842;9.32e-12;3!CL:0000898;1.60e-11;3!CL:0000775;2.25e-11;3!CL:0000084;1.14e-10;25!CL:0000542;6.23e-09;53!CL:0000815;4.00e-08;2!CL:0000792;4.00e-08;2!CL:0002677;4.00e-08;2!CL:0002087;3.11e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.12e-22,136;CL:0000624,1.89e-22,6;CL:0002087,1.57e-19,115;CL:0000037,8.74e-17,168;CL:0000791,1.19e-15,18;CL:0000789,1.19e-15,18;CL:0002420,1.19e-15,18;CL:0002419,1.19e-15,18;CL:0000790,1.19e-15,18;CL:0000988,1.63e-15,177;CL:0002031,1.99e-15,120;CL:0000838,1.01e-14,52;CL:0000542,2.27e-14,53;CL:0000051,2.27e-14,53;CL:0002032,5.47e-13,161;CL:0000837,5.47e-13,161;CL:0000623,5.12e-12,3;CL:0000825,5.12e-12,3;CL:0000226,8.88e-12,3;CL:0000842,8.88e-12,3;CL:0000898,9.20e-12,3;CL:0000775,1.23e-11,3;CL:0000084,9.09e-11,25;CL:0000827,9.09e-11,25;CL:0000815,2.25e-08,2;CL:0000792,2.25e-08,2;CL:0002677,2.25e-08,2;CL:0002393,7.46e-07,9;CL:0002397,7.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.65e-15;18!CL:0000051;6.23e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-08!102;UBERON:0003061!2.19e-08!102;UBERON:0002193!8.45e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.95e-07,98;UBERON:0003061,1.95e-07,98;UBERON:0002193,2.75e-07,108;UBERON:0002384,6.48e-07,371 | |||
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| |||
|short_description=p@chr2:42448566..42448570,+ | |||
}} |
Latest revision as of 10:11, 29 July 2015
Short description: | p@chr2:42448566..42448570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:42448566..42448570, + |
Coexpression cluster: | C2051_CD14_CD4_Natural_CD8_Neutrophils_CD19_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.12e-22 | 136 |
CD4-positive, alpha-beta T cell | 1.89e-22 | 6 |
nongranular leukocyte | 1.57e-19 | 115 |
hematopoietic stem cell | 8.74e-17 | 168 |
mature alpha-beta T cell | 1.19e-15 | 18 |
alpha-beta T cell | 1.19e-15 | 18 |
immature T cell | 1.19e-15 | 18 |
mature T cell | 1.19e-15 | 18 |
immature alpha-beta T cell | 1.19e-15 | 18 |
hematopoietic cell | 1.63e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.99e-15 | 120 |
lymphoid lineage restricted progenitor cell | 1.01e-14 | 52 |
lymphocyte | 2.27e-14 | 53 |
common lymphoid progenitor | 2.27e-14 | 53 |
hematopoietic oligopotent progenitor cell | 5.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-13 | 161 |
natural killer cell | 5.12e-12 | 3 |
pro-NK cell | 5.12e-12 | 3 |
single nucleate cell | 8.88e-12 | 3 |
mononuclear cell | 8.88e-12 | 3 |
naive T cell | 9.20e-12 | 3 |
neutrophil | 1.23e-11 | 3 |
T cell | 9.09e-11 | 25 |
pro-T cell | 9.09e-11 | 25 |
regulatory T cell | 2.25e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.25e-08 | 2 |
naive regulatory T cell | 2.25e-08 | 2 |
intermediate monocyte | 7.46e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.46e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.95e-07 | 98 |
blood island | 1.95e-07 | 98 |
hemolymphoid system | 2.75e-07 | 108 |
connective tissue | 6.48e-07 | 371 |