FFCP PHASE1:Hg19::chr2:66918539..66918554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000435389,ENST00000443420_5end | |association_with_transcript=-12bp_to_ENST00000435389,ENST00000443420_5end | ||
|cluster_id=chr2:66918539..66918554,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_ENST00000435389_5end,CAGE_peak_1_at_ENST00000443420_5end | |description=CAGE_peak_1_at_ENST00000435389_5end,CAGE_peak_1_at_ENST00000443420_5end | ||
|id=chr2:66918539..66918554,+ | |id=chr2:66918539..66918554,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.30e-11;3!CL:0002622;2.52e-11;3!CL:0000622;5.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.11e-11,3;CL:0002622,3.47e-11,3;CL:0000622,5.29e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.12e-13;3!UBERON:0007297;8.86e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-19!115;UBERON:0003076!1.09e-17!15;UBERON:0003057!1.09e-17!15;UBERON:0004733!6.52e-14!12;UBERON:0002028!6.52e-14!12;UBERON:0007277!6.52e-14!12;UBERON:0004921!1.09e-12!129;UBERON:0004185!1.09e-12!129;UBERON:0004732!1.23e-12!13;UBERON:0000059!2.78e-12!11;UBERON:0001155!4.74e-12!9;UBERON:0001007!5.40e-10!155;UBERON:0001555!5.40e-10!155;UBERON:0007026!5.40e-10!155;UBERON:0002680!8.65e-10!9;UBERON:0001895!8.65e-10!9;UBERON:0010092!8.65e-10!9;UBERON:0000063!1.68e-09!97;UBERON:0004119!2.57e-09!169;UBERON:0000925!2.57e-09!169;UBERON:0006595!2.57e-09!169;UBERON:0000062!4.51e-09!511;UBERON:0000922!5.07e-09!612;UBERON:0005409!1.70e-08!35;UBERON:0000468!2.98e-08!659;UBERON:0000481!3.21e-08!347;UBERON:0002050!5.70e-08!605;UBERON:0005423!5.70e-08!605;UBERON:0001046!7.95e-08!19;UBERON:0000475!8.23e-08!365;UBERON:0000160!8.71e-08!27;UBERON:0001044!9.49e-08!6;UBERON:0003293!9.49e-08!6;UBERON:0003294!9.49e-08!6;UBERON:0010047!9.49e-08!6;UBERON:0000167!9.49e-08!6;UBERON:0002298!9.59e-08!8;UBERON:0003101!1.31e-07!22;UBERON:0000079!1.31e-07!22;UBERON:0000923!1.64e-07!604;UBERON:0005291!1.64e-07!604;UBERON:0006598!1.64e-07!604;UBERON:0002532!1.64e-07!604;UBERON:0000077!2.50e-07!130;UBERON:0000467!2.87e-07!625;UBERON:0000480!3.26e-07!626;UBERON:0004111!6.37e-07!241;UBERON:0006947!9.13e-07!3;UBERON:0004054!9.13e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.48e-19!115;UBERON:0003076!1.09e-17!15;UBERON:0003057!1.09e-17!15;UBERON:0004733!6.52e-14!12;UBERON:0002028!6.52e-14!12;UBERON:0007277!6.52e-14!12;UBERON:0004921!1.09e-12!129;UBERON:0004185!1.09e-12!129;UBERON:0004732!1.23e-12!13;UBERON:0000059!2.78e-12!11;UBERON:0001155!4.74e-12!9;UBERON:0001007!5.40e-10!155;UBERON:0001555!5.40e-10!155;UBERON:0007026!5.40e-10!155;UBERON:0002680!8.65e-10!9;UBERON:0001895!8.65e-10!9;UBERON:0010092!8.65e-10!9;UBERON:0000063!1.68e-09!97;UBERON:0004119!2.57e-09!169;UBERON:0000925!2.57e-09!169;UBERON:0006595!2.57e-09!169;UBERON:0000062!4.51e-09!511;UBERON:0000922!5.07e-09!612;UBERON:0005409!1.70e-08!35;UBERON:0000468!2.98e-08!659;UBERON:0000481!3.21e-08!347;UBERON:0002050!5.70e-08!605;UBERON:0005423!5.70e-08!605;UBERON:0001046!7.95e-08!19;UBERON:0000475!8.23e-08!365;UBERON:0000160!8.71e-08!27;UBERON:0001044!9.49e-08!6;UBERON:0003293!9.49e-08!6;UBERON:0003294!9.49e-08!6;UBERON:0010047!9.49e-08!6;UBERON:0000167!9.49e-08!6;UBERON:0002298!9.59e-08!8;UBERON:0003101!1.31e-07!22;UBERON:0000079!1.31e-07!22;UBERON:0000923!1.64e-07!604;UBERON:0005291!1.64e-07!604;UBERON:0006598!1.64e-07!604;UBERON:0002532!1.64e-07!604;UBERON:0000077!2.50e-07!130;UBERON:0000467!2.87e-07!625;UBERON:0000480!3.26e-07!626;UBERON:0004111!6.37e-07!241;UBERON:0006947!9.13e-07!3;UBERON:0004054!9.13e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;7.63e-20;11!UBERON:0004921;6.64e-19;33!UBERON:0001155;1.25e-18;9!UBERON:0000160;3.05e-18;17!UBERON:0002680;8.57e-15;9!UBERON:0001895;8.57e-15;9!UBERON:0004733;9.86e-15;12!UBERON:0002028;9.86e-15;12!UBERON:0005409;7.85e-14;22!UBERON:0004732;1.63e-13;13!UBERON:0006947;3.28e-12;3!UBERON:0004054;3.28e-12;3!UBERON:0000988;1.53e-11;3!UBERON:0002298;4.88e-10;6!UBERON:0004175;5.64e-10;21!UBERON:0001044;6.40e-10;6!UBERON:0003293;6.40e-10;6!UBERON:0003294;6.40e-10;6!UBERON:0010047;6.40e-10;6!UBERON:0003408;6.40e-10;6!UBERON:0000167;6.40e-10;6!UBERON:0003101;2.76e-09;22!UBERON:0000079;2.76e-09;22!UBERON:0005904;2.96e-09;4!UBERON:0002148;4.16e-08;2!UBERON:0006331;4.16e-08;2!UBERON:0009662;4.16e-08;2!UBERON:0004907;1.97e-07;5!UBERON:0003937;2.39e-07;12!UBERON:0005399;2.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,8.36e-20,11;UBERON:0001155,1.36e-18,9;UBERON:0000160,3.42e-18,17;UBERON:0007023,3.17e-15,114;UBERON:0002680,9.23e-15,9;UBERON:0001895,9.23e-15,9;UBERON:0010092,9.23e-15,9;UBERON:0003076,9.66e-15,15;UBERON:0003057,9.66e-15,15;UBERON:0004733,1.04e-14,12;UBERON:0002028,1.04e-14,12;UBERON:0007277,1.04e-14,12;UBERON:0005409,1.98e-14,25;UBERON:0004732,1.71e-13,13;UBERON:0011216,9.12e-13,223;UBERON:0004921,1.85e-12,118;UBERON:0006947,3.41e-12,3;UBERON:0004054,3.41e-12,3;UBERON:0000988,1.70e-11,3;UBERON:0001046,3.53e-11,19;UBERON:0001007,4.54e-10,145;UBERON:0001555,4.54e-10,145;UBERON:0007026,4.54e-10,145;UBERON:0002298,5.19e-10,6;UBERON:0001044,6.41e-10,6;UBERON:0003293,6.41e-10,6;UBERON:0003294,6.41e-10,6;UBERON:0010047,6.41e-10,6;UBERON:0000167,6.41e-10,6;UBERON:0003101,2.80e-09,22;UBERON:0000079,2.80e-09,22;UBERON:0005904,3.04e-09,4;UBERON:0005156,8.25e-09,59;UBERON:0000990,8.25e-09,59;UBERON:0004119,1.42e-08,160;UBERON:0000925,1.42e-08,160;UBERON:0006595,1.42e-08,160;UBERON:0004175,3.58e-08,25;UBERON:0002148,4.47e-08,2;UBERON:0006331,4.47e-08,2;UBERON:0009662,4.47e-08,2;UBERON:0000922,1.23e-07,592;UBERON:0004907,1.87e-07,5;UBERON:0005423,2.37e-07,581;UBERON:0003937,2.55e-07,12;UBERON:0005399,2.55e-07,12 | |||
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| ||
|short_description=p1@ENST00000435389,p1@ENST00000443420 | |short_description=p1@ENST00000435389,p1@ENST00000443420 | ||
}} | }} |
Latest revision as of 11:33, 29 July 2015
Short description: | p1@ENST00000435389, p1@ENST00000443420 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000435389_5end, CAGE_peak_1_at_ENST00000443420_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -12bp_to_ENST00000435389, ENST00000443420_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.11e-11 | 3 |
prostate stromal cell | 3.47e-11 | 3 |
acinar cell | 5.29e-07 | 5 |