FFCP PHASE1:Hg19::chr2:7054041..7054045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:7054041..7054045,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr2:7054041..7054045,- | |description=CAGE_peak_at_chr2:7054041..7054045,- | ||
|id=chr2:7054041..7054045,- | |id=chr2:7054041..7054045,- | ||
|ontology_enrichment_celltype=CL:0000791!5.14e-22!18;CL:0000789!5.14e-22!18;CL:0002420!5.14e-22!18;CL:0002419!5.14e-22!18;CL:0000790!5.14e-22!18;CL:0000625!9.06e-19!11;CL:0000084!1.18e-15!25;CL:0000827!1.18e-15!25;CL:0002127!3.74e-10!1;CL:0000914!3.74e-10!1;CL:0000911!3.74e-10!1;CL:0000814!3.74e-10!1;CL:0002042!3.74e-10!1;CL:0002039!3.74e-10!1;CL:0002040!3.74e-10!1;CL:0002041!3.74e-10!1;CL:0000838!3.96e-07!52;CL:0000542!5.58e-07!53;CL:0000051!5.58e-07!53 | |ontology_enrichment_celltype=CL:0000791!5.14e-22!18;CL:0000789!5.14e-22!18;CL:0002420!5.14e-22!18;CL:0002419!5.14e-22!18;CL:0000790!5.14e-22!18;CL:0000625!9.06e-19!11;CL:0000084!1.18e-15!25;CL:0000827!1.18e-15!25;CL:0002127!3.74e-10!1;CL:0000914!3.74e-10!1;CL:0000911!3.74e-10!1;CL:0000814!3.74e-10!1;CL:0002042!3.74e-10!1;CL:0002039!3.74e-10!1;CL:0002040!3.74e-10!1;CL:0002041!3.74e-10!1;CL:0000838!3.96e-07!52;CL:0000542!5.58e-07!53;CL:0000051!5.58e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.23e-66;1!CL:0000911;1.23e-66;1!CL:0000814;1.23e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.23e-66,1;CL:0000914,1.23e-66,1;CL:0000911,1.23e-66,1;CL:0000814,1.23e-66,1;CL:0002042,1.23e-66,1;CL:0002039,1.23e-66,1;CL:0002040,1.23e-66,1;CL:0002041,1.23e-66,1;CL:0000893,3.61e-34,2;CL:0002489,3.61e-34,2;CL:0000809,3.61e-34,2;CL:0000808,3.61e-34,2;CL:0000894,3.61e-34,2;CL:0000806,3.61e-34,2;CL:0000807,3.61e-34,2;CL:0000805,3.61e-34,2;CL:0002425,3.61e-34,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.61e-34;2!UBERON:0009847;3.27e-23;3!UBERON:0003353;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000029!4.87e-10!1;UBERON:0002370!1.84e-09!4;UBERON:0005058!1.84e-09!4;UBERON:0009113!1.84e-09!4;UBERON:0003295!1.84e-09!4;UBERON:0005562!1.84e-09!4;UBERON:0002372!2.26e-09!1;UBERON:0001961!2.26e-09!1;UBERON:0001744!2.26e-09!1;UBERON:0001735!2.26e-09!1;UBERON:0001042!4.54e-08!10;UBERON:0009145!4.54e-08!10;UBERON:0006562!2.23e-07!11 | |ontology_enrichment_uberon=UBERON:0000029!4.87e-10!1;UBERON:0002370!1.84e-09!4;UBERON:0005058!1.84e-09!4;UBERON:0009113!1.84e-09!4;UBERON:0003295!1.84e-09!4;UBERON:0005562!1.84e-09!4;UBERON:0002372!2.26e-09!1;UBERON:0001961!2.26e-09!1;UBERON:0001744!2.26e-09!1;UBERON:0001735!2.26e-09!1;UBERON:0001042!4.54e-08!10;UBERON:0009145!4.54e-08!10;UBERON:0006562!2.23e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000077,2.96e-10,29;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11;UBERON:0002367,2.47e-07,11;UBERON:0010147,2.47e-07,11;UBERON:0009846,2.47e-07,11;UBERON:0003353,2.47e-07,11;UBERON:0004902,2.47e-07,11;UBERON:0003820,2.47e-07,11;UBERON:0009847,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12 | |||
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|short_description=p@chr2:7054041..7054045,- | |short_description=p@chr2:7054041..7054045,- | ||
}} | }} |
Latest revision as of 11:57, 29 July 2015
Short description: | p@chr2:7054041..7054045, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:7054041..7054045, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.23e-66 | 1 |
immature NK T cell | 1.23e-66 | 1 |
effector T cell | 1.23e-66 | 1 |
mature NK T cell | 1.23e-66 | 1 |
immature NK T cell stage IV | 1.23e-66 | 1 |
immature NK T cell stage I | 1.23e-66 | 1 |
immature NK T cell stage II | 1.23e-66 | 1 |
immature NK T cell stage III | 1.23e-66 | 1 |
thymocyte | 3.61e-34 | 2 |
double negative thymocyte | 3.61e-34 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-34 | 2 |
DN4 thymocyte | 3.61e-34 | 2 |
DN1 thymic pro-T cell | 3.61e-34 | 2 |
DN2 thymocyte | 3.61e-34 | 2 |
DN3 thymocyte | 3.61e-34 | 2 |
immature single positive thymocyte | 3.61e-34 | 2 |
early T lineage precursor | 3.61e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
prostate gland | 2.47e-07 | 11 |
male accessory sex gland | 2.47e-07 | 11 |
embryonic cloacal epithelium | 2.47e-07 | 11 |
epithelium of hindgut | 2.47e-07 | 11 |
urogenital sinus epithelium | 2.47e-07 | 11 |
prostate bud | 2.47e-07 | 11 |
prostate field | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |