FFCP PHASE1:Hg19::chr2:74758077..74758089,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:74758077..74758089,- | |||
|coexpression_cluster_id=C1900 | |||
|description=CAGE_peak_at_chr2:74758077..74758089,- | |description=CAGE_peak_at_chr2:74758077..74758089,- | ||
|id=chr2:74758077..74758089,- | |id=chr2:74758077..74758089,- | ||
|ontology_enrichment_celltype=CL:0000738!2.74e-16!140;CL:0000988!1.93e-13!182;CL:0002031!5.76e-13!124;CL:0002032!3.65e-12!165;CL:0000837!3.65e-12!165;CL:0000037!4.88e-12!172;CL:0000566!4.88e-12!172;CL:0002087!1.08e-09!119;CL:0000542!1.29e-09!53;CL:0000051!1.29e-09!53;CL:0000840!1.93e-09!5;CL:0001029!1.93e-09!5;CL:0000838!9.82e-09!52;CL:0000990!1.42e-08!8;CL:0000623!3.67e-08!3;CL:0000825!3.67e-08!3;CL:0002274!4.59e-08!5;CL:0000457!4.59e-08!5;CL:0002191!4.59e-08!5;CL:0000097!4.59e-08!5;CL:0000831!4.59e-08!5;CL:0002028!4.59e-08!5;CL:0000451!7.24e-07!10;CL:0000080!8.59e-07!6 | |ontology_enrichment_celltype=CL:0000738!2.74e-16!140;CL:0000988!1.93e-13!182;CL:0002031!5.76e-13!124;CL:0002032!3.65e-12!165;CL:0000837!3.65e-12!165;CL:0000037!4.88e-12!172;CL:0000566!4.88e-12!172;CL:0002087!1.08e-09!119;CL:0000542!1.29e-09!53;CL:0000051!1.29e-09!53;CL:0000840!1.93e-09!5;CL:0001029!1.93e-09!5;CL:0000838!9.82e-09!52;CL:0000990!1.42e-08!8;CL:0000623!3.67e-08!3;CL:0000825!3.67e-08!3;CL:0002274!4.59e-08!5;CL:0000457!4.59e-08!5;CL:0002191!4.59e-08!5;CL:0000097!4.59e-08!5;CL:0000831!4.59e-08!5;CL:0002028!4.59e-08!5;CL:0000451!7.24e-07!10;CL:0000080!8.59e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.01e-31;2!CL:0000771;2.01e-31;2!CL:0001016;2.01e-31;2!CL:0000097;1.74e-28;5!CL:0000163;3.79e-16;9!CL:0000081;3.01e-13;11!CL:0000453;3.33e-13;5!CL:0000840;3.66e-11;5!CL:0000094;1.34e-08;8!CL:0000990;9.68e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.60e-31,2;CL:0001016,1.60e-31,2;CL:0000771,2.54e-31,2;CL:0000097,1.59e-28,5;CL:0002028,1.59e-28,5;CL:0000163,3.61e-16,9;CL:0000453,3.03e-13,5;CL:0000081,3.21e-13,11;CL:0000988,2.70e-11,177;CL:0000840,3.39e-11,5;CL:0001029,3.39e-11,5;CL:0000738,3.13e-10,136;CL:0000094,1.42e-08,8;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,4.23e-08,168;CL:0000990,9.20e-08,8;CL:0002031,1.92e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.64e-10!112;UBERON:0002390!9.19e-09!102;UBERON:0003061!9.19e-09!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.61e-07,98;UBERON:0003061,3.61e-07,98;UBERON:0002331,4.39e-07,10;UBERON:0000358,4.39e-07,10;UBERON:0000307,4.39e-07,10;UBERON:0000091,4.39e-07,10;UBERON:0000087,4.39e-07,10;UBERON:0007010,4.39e-07,10;UBERON:0007806,4.39e-07,10;UBERON:0008780,4.39e-07,10;UBERON:0005728,4.39e-07,10 | |||
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| ||
|short_description=p@chr2:74758077..74758089,- | |short_description=p@chr2:74758077..74758089,- | ||
}} | }} |
Latest revision as of 12:22, 29 July 2015
Short description: | p@chr2:74758077..74758089, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74758077..74758089, - |
Coexpression cluster: | C1900_Mast_cord_immature_CD14_CD34_chronic_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.60e-31 | 2 |
immature CD1a-positive Langerhans cell | 1.60e-31 | 2 |
eosinophil | 2.54e-31 | 2 |
mast cell | 1.59e-28 | 5 |
basophil mast progenitor cell | 1.59e-28 | 5 |
endocrine cell | 3.61e-16 | 9 |
Langerhans cell | 3.03e-13 | 5 |
blood cell | 3.21e-13 | 11 |
hematopoietic cell | 2.70e-11 | 177 |
immature conventional dendritic cell | 3.39e-11 | 5 |
common dendritic progenitor | 3.39e-11 | 5 |
leukocyte | 3.13e-10 | 136 |
granulocyte | 1.42e-08 | 8 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 4.23e-08 | 168 |
conventional dendritic cell | 9.20e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.92e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.61e-07 | 98 |
blood island | 3.61e-07 | 98 |
umbilical cord | 4.39e-07 | 10 |
blastocyst | 4.39e-07 | 10 |
blastula | 4.39e-07 | 10 |
bilaminar disc | 4.39e-07 | 10 |
inner cell mass | 4.39e-07 | 10 |
cleaving embryo | 4.39e-07 | 10 |
connecting stalk | 4.39e-07 | 10 |
inner cell mass derived epiblast | 4.39e-07 | 10 |
extraembryonic mesoderm | 4.39e-07 | 10 |