FFCP PHASE1:Hg19::chr3:145779025..145779029,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=436bp_to_AL110176_5end | |||
|cluster_id=chr3:145779025..145779029,- | |||
|description=CAGE_peak_1_at_AL110176_5end | |||
|id=chr3:145779025..145779029,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.76e-13;1!CL:0000054;3.69e-07;2!CL:0000137;3.69e-07;2!CL:0000092;3.69e-07;2!CL:0002535;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.82e-13,1;CL:0002535,3.09e-07,2;CL:0000054,4.17e-07,2;CL:0000137,4.17e-07,2;CL:0000092,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.66e-10;11!UBERON:0003104;4.15e-09;31!UBERON:0009497;1.11e-08;13 | |||
|ontology_enrichment_disease=DOID:2394!1.66e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:5662;4.76e-13;1!DOID:3571;4.76e-13;1!DOID:200;3.69e-07;2!DOID:3350;3.69e-07;2!DOID:4305;3.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.38e-13,1;DOID:3571,8.64e-13,1;DOID:200,4.17e-07,2;DOID:4305,4.17e-07,2;DOID:3350,4.98e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.71e-13;1!UBERON:0005208;1.71e-13;1!UBERON:0004145;1.71e-13;1!UBERON:0005946;1.71e-13;1!UBERON:0005965;1.71e-13;1!UBERON:0002078;1.71e-13;1!UBERON:0007195;4.76e-13;1!UBERON:0002081;2.21e-07;2!UBERON:0002133;2.21e-07;2!UBERON:0000078;3.69e-07;2!UBERON:0006955;3.69e-07;2!UBERON:0004801;3.69e-07;2!UBERON:0002012;3.69e-07;2!UBERON:0008886;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004145,1.00e-16,3;UBERON:0002134,1.82e-13,1;UBERON:0005208,1.82e-13,1;UBERON:0005946,1.82e-13,1;UBERON:0005965,1.82e-13,1;UBERON:0002078,1.82e-13,1;UBERON:0007195,7.68e-13,1;UBERON:0002081,2.28e-07,2;UBERON:0002133,2.28e-07,2;UBERON:0010227,2.28e-07,2;UBERON:0006955,3.09e-07,2;UBERON:0004801,3.09e-07,2;UBERON:0000078,4.42e-07,2;UBERON:0007497,4.42e-07,2;UBERON:0003643,4.42e-07,2;UBERON:0003504,4.42e-07,2;UBERON:0003469,4.42e-07,2;UBERON:0003496,4.42e-07,2;UBERON:0002012,4.42e-07,2;UBERON:0008886,4.42e-07,2;UBERON:0007303,4.42e-07,2;UBERON:0002061,4.42e-07,2;UBERON:0005432,4.42e-07,2;UBERON:0004363,4.42e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0.339121184620975,0.386521706326594,0.545492241181669,0.860413786167011,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.45579603071565,0.713715955188647,0.157702415033935,0.35142424497814,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0.40101294060657,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0.322260734604821,0.435050081742686,0.255679882248303,0.0890320356467374,0.661139661443912,0.192190067365106,2.67986696238627,0.2023155617111,0,0.94443704049192,0,0,0,0.869932992075073,0,0.429374660225974,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,1.22439575525196,0,0,0,0,1.25966373927138,0,0.246169610922139,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0.227884111694002,0,0,0.108647371922008,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0.313932918407225,0,0.853828638089378,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0.0633107959558787,0,0.240476460754601,0,0,0,0,0.171594997861965,0.288109595976299,0.621262677827163,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0.837847203816763,0.458320848023367,2.15361907373044,0,0,0,0.201550417460179,1.08089965062721,0,0,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0.129282956361551,0.26446520348538,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0.612691153526923,1.31149052283922,0,0,0,0,0,0.332787154610557,0,0,0.124980407962107,0,0,0,0,0,0.597019211547496,0,0,0.378806010550178,0.251567901752575,0,0.457680136793847,0.151230923763239,0.15543720058278,0.887130899937803,0.159296767163702,0,0.776314784381297,0.414706207840855,0.265841714557995,0.521745061811734,0.751288044986092,1.52322084867518,0.813741466409323,0.545545977607678,0.429642228169954,0.464033759878494,0.796191777397232,0.400027764663154,0.686791410365586,0,0,0.57785949122191,0.643324774124777,0.260994291965212,0,0.463044948647668,0,0,0,0.219284049578707,0.176689145945881,0.578742114812744,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0,0,0,0,0.183428598521679,0,1.1441462864015,0,0,0,1.21023041222112,0,0,0.327543835020193,0,0,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,1.20041606606193,0,0,0.472775363535873,0.222462803784138,0,0,0,0.913158720509496,1.07963795609311,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0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| |||
|short_description=p1@AL110176 | |||
}} |
Latest revision as of 16:37, 29 July 2015
Short description: | p1@AL110176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AL110176_5end |
Coexpression cluster: | NA |
Association with transcript: | 436bp_to_AL110176_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.82e-13 | 1 |
epithelial cell of cervix | 3.09e-07 | 2 |
bone matrix secreting cell | 4.17e-07 | 2 |
osteocyte | 4.17e-07 | 2 |
osteoclast | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
outflow tract | 1.00e-16 | 3 |
tricuspid valve | 1.82e-13 | 1 |
right atrium valve | 1.82e-13 | 1 |
outflow tract of atrium | 1.82e-13 | 1 |
outflow part of right atrium | 1.82e-13 | 1 |
right cardiac atrium | 1.82e-13 | 1 |
stroma of bone marrow | 7.68e-13 | 1 |
cardiac atrium | 2.28e-07 | 2 |
atrioventricular valve | 2.28e-07 | 2 |
future cardiac atrium | 2.28e-07 | 2 |
uterine epithelium | 3.09e-07 | 2 |
cervix epithelium | 3.09e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.42e-07 | 2 |
developing epithelial placode | 4.42e-07 | 2 |
respiratory system arterial blood vessel | 4.42e-07 | 2 |
respiratory system blood vessel | 4.42e-07 | 2 |
respiratory system artery | 4.42e-07 | 2 |
head blood vessel | 4.42e-07 | 2 |
pulmonary artery | 4.42e-07 | 2 |
pulmonary vascular system | 4.42e-07 | 2 |
pharyngeal vasculature | 4.42e-07 | 2 |
truncus arteriosus | 4.42e-07 | 2 |
aortic sac | 4.42e-07 | 2 |
pharyngeal arch artery | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.38e-13 | 1 |
liver cancer | 8.64e-13 | 1 |
giant cell tumor | 4.17e-07 | 2 |
bone giant cell tumor | 4.17e-07 | 2 |
mesenchymal cell neoplasm | 4.98e-07 | 2 |