FFCP PHASE1:Hg19::chr3:165635820..165635825,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:165635820..165635825,- | |||
|description=CAGE_peak_at_chr3:165635820..165635825,- | |description=CAGE_peak_at_chr3:165635820..165635825,- | ||
|id=chr3:165635820..165635825,- | |id=chr3:165635820..165635825,- | ||
|ontology_enrichment_celltype=CL:0002322!1.78e-27!5;CL:0000148!2.87e-08!10;CL:0000541!2.87e-08!10 | |ontology_enrichment_celltype=CL:0002322!1.78e-27!5;CL:0000148!2.87e-08!10;CL:0000541!2.87e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.48e-12;2!CL:0000054;2.32e-12;2!CL:0000137;2.32e-12;2!CL:0000092;2.32e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.48e-12,2;CL:0000054,2.32e-12,2;CL:0000137,2.32e-12,2;CL:0000092,2.32e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.62e-18!8;DOID:0060085!2.37e-10!1;DOID:3165!2.37e-10!1;DOID:0060121!2.37e-10!1;DOID:2438!2.37e-10!1;DOID:4418!2.37e-10!1;DOID:1799!5.30e-10!1;DOID:10165!5.30e-10!1;DOID:1798!5.30e-10!1;DOID:8692!5.06e-07!31 | |ontology_enrichment_disease=DOID:1036!4.62e-18!8;DOID:0060085!2.37e-10!1;DOID:3165!2.37e-10!1;DOID:0060121!2.37e-10!1;DOID:2438!2.37e-10!1;DOID:4418!2.37e-10!1;DOID:1799!5.30e-10!1;DOID:10165!5.30e-10!1;DOID:1798!5.30e-10!1;DOID:8692!5.06e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.32e-25;8!DOID:0060085;2.62e-23;1!DOID:3165;2.62e-23;1!DOID:0060121;2.62e-23;1!DOID:2438;2.62e-23;1!DOID:4418;2.62e-23;1!DOID:200;2.32e-12;2!DOID:4305;2.32e-12;2!DOID:8692;2.55e-07;31!DOID:2531;6.72e-07;51!DOID:0060083;6.72e-07;51!DOID:0060072;8.14e-07;4!DOID:5409;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.32e-25,8;DOID:0060085,2.62e-23,1;DOID:3165,2.62e-23,1;DOID:0060121,2.62e-23,1;DOID:2438,2.62e-23,1;DOID:4418,2.62e-23,1;DOID:200,2.32e-12,2;DOID:4305,2.32e-12,2;DOID:2531,2.40e-07,51;DOID:0060083,2.40e-07,51;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239;DOID:8692,4.21e-07,31;DOID:0060072,8.14e-07,4;DOID:5409,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.84e-10!1;UBERON:0009842!2.84e-10!1;UBERON:0003704!2.84e-10!1;UBERON:0001171!2.84e-10!1;UBERON:0001172!2.84e-10!1 | |ontology_enrichment_uberon=UBERON:0001282!2.84e-10!1;UBERON:0009842!2.84e-10!1;UBERON:0003704!2.84e-10!1;UBERON:0001171!2.84e-10!1;UBERON:0001172!2.84e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;4.59e-23;1!UBERON:0009842;4.59e-23;1!UBERON:0003704;4.59e-23;1!UBERON:0001171;4.59e-23;1!UBERON:0001172;4.59e-23;1!UBERON:0002294;1.27e-13;7!UBERON:0001173;1.27e-13;7!UBERON:0002110;8.31e-09;3!UBERON:0001280;1.35e-08;3!UBERON:0004647;1.35e-08;3!UBERON:0000014;8.14e-07;4!UBERON:0002394;9.36e-07;4!UBERON:0003928;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.10e-23,1;UBERON:0009842,4.10e-23,1;UBERON:0003704,4.10e-23,1;UBERON:0001171,4.10e-23,1;UBERON:0001172,4.10e-23,1;UBERON:0002294,7.96e-11,9;UBERON:0001173,7.96e-11,9;UBERON:0004912,7.96e-11,9;UBERON:0002110,8.31e-09,3;UBERON:0006242,8.31e-09,3;UBERON:0001280,1.30e-08,3;UBERON:0004647,1.30e-08,3;UBERON:0005171,1.30e-08,3;UBERON:0000014,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,1.16684937732704,0,0,0,0,0,0,0,4.06072189110925,3.92125068635479,4.86682602229944,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0,0,6.6531820808773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35866559210006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,1.16684937732704,0,0,0,0,0,0,0,4.06072189110925,3.92125068635479,4.86682602229944,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0,0,6.6531820808773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35866559210006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:165635820..165635825,- | |short_description=p@chr3:165635820..165635825,- | ||
}} | }} |
Latest revision as of 17:57, 29 July 2015
Short description: | p@chr3:165635820..165635825, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:165635820..165635825, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.48e-12 | 2 |
bone matrix secreting cell | 2.32e-12 | 2 |
osteocyte | 2.32e-12 | 2 |
osteoclast | 2.32e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.10e-23 | 1 |
acinus | 4.10e-23 | 1 |
intrahepatic bile duct | 4.10e-23 | 1 |
portal lobule | 4.10e-23 | 1 |
hepatic acinus | 4.10e-23 | 1 |
biliary system | 7.96e-11 | 9 |
biliary tree | 7.96e-11 | 9 |
biliary bud | 7.96e-11 | 9 |
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
liver parenchyma | 1.30e-08 | 3 |
liver lobule | 1.30e-08 | 3 |
hepatic duct | 1.30e-08 | 3 |
zone of skin | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.32e-25 | 8 |
organ system benign neoplasm | 2.62e-23 | 1 |
skin benign neoplasm | 2.62e-23 | 1 |
integumentary system benign neoplasm | 2.62e-23 | 1 |
dermis tumor | 2.62e-23 | 1 |
cutaneous fibrous histiocytoma | 2.62e-23 | 1 |
giant cell tumor | 2.32e-12 | 2 |
bone giant cell tumor | 2.32e-12 | 2 |
hematologic cancer | 2.40e-07 | 51 |
immune system cancer | 2.40e-07 | 51 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |
myeloid leukemia | 4.21e-07 | 31 |
benign neoplasm | 8.14e-07 | 4 |
lung small cell carcinoma | 9.63e-07 | 4 |