FFCP PHASE1:Hg19::chr5:142388947..142388964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:142388947..142388964,+ | |||
|coexpression_cluster_id=C1831 | |coexpression_cluster_id=C1831 | ||
|description=CAGE_peak_at_chr5:142388947..142388964,+ | |description=CAGE_peak_at_chr5:142388947..142388964,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!6.29e-55!42;CL:0000766!4.21e-51!76;CL:0000860!8.82e-51!45;CL:0000839!4.29e-37!70;CL:0000557!1.81e-36!71;CL:0000738!2.71e-36!140;CL:0002194!3.31e-36!63;CL:0000576!3.31e-36!63;CL:0000040!3.31e-36!63;CL:0000559!3.31e-36!63;CL:0002009!6.94e-35!65;CL:0000763!6.90e-32!112;CL:0000049!6.90e-32!112;CL:0000037!1.16e-27!172;CL:0000566!1.16e-27!172;CL:0002087!3.98e-27!119;CL:0002032!5.67e-26!165;CL:0000837!5.67e-26!165;CL:0002031!1.34e-25!124;CL:0000988!1.39e-25!182;CL:0000094!3.09e-16!8;CL:0000081!1.32e-11!11;CL:0000134!3.69e-10!358;CL:0002320!9.15e-10!365;CL:0000219!5.06e-09!390;CL:0000771!9.23e-09!2;CL:0000048!9.73e-07!430 | |ontology_enrichment_celltype=CL:0002057!6.29e-55!42;CL:0000766!4.21e-51!76;CL:0000860!8.82e-51!45;CL:0000839!4.29e-37!70;CL:0000557!1.81e-36!71;CL:0000738!2.71e-36!140;CL:0002194!3.31e-36!63;CL:0000576!3.31e-36!63;CL:0000040!3.31e-36!63;CL:0000559!3.31e-36!63;CL:0002009!6.94e-35!65;CL:0000763!6.90e-32!112;CL:0000049!6.90e-32!112;CL:0000037!1.16e-27!172;CL:0000566!1.16e-27!172;CL:0002087!3.98e-27!119;CL:0002032!5.67e-26!165;CL:0000837!5.67e-26!165;CL:0002031!1.34e-25!124;CL:0000988!1.39e-25!182;CL:0000094!3.09e-16!8;CL:0000081!1.32e-11!11;CL:0000134!3.69e-10!358;CL:0002320!9.15e-10!365;CL:0000219!5.06e-09!390;CL:0000771!9.23e-09!2;CL:0000048!9.73e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000771;3.93e-37;2!CL:0000094;5.71e-21;8!CL:0000081;1.90e-15;11!CL:0000860;1.22e-12;33!CL:0002057;1.22e-12;33!CL:0000473;6.89e-08;39!CL:0000234;6.89e-08;39!CL:0000763;1.54e-07;100!CL:0000767;2.71e-07;3!CL:0000766;4.14e-07;69 | |ontology_enrichment_celltype_v019=CL:0000771;3.93e-37;2!CL:0000094;5.71e-21;8!CL:0000081;1.90e-15;11!CL:0000860;1.22e-12;33!CL:0002057;1.22e-12;33!CL:0000473;6.89e-08;39!CL:0000234;6.89e-08;39!CL:0000763;1.54e-07;100!CL:0000767;2.71e-07;3!CL:0000766;4.14e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.94e-37,2;CL:0000094,5.16e-21,8;CL:0000081,1.76e-15,11;CL:0000766,2.55e-15,72;CL:0000860,9.10e-11,42;CL:0002057,9.10e-11,42;CL:0000763,4.19e-10,108;CL:0000049,4.19e-10,108;CL:0000473,1.98e-09,48;CL:0000234,1.98e-09,48;CL:0000738,6.30e-08,136;CL:0002194,1.50e-07,59;CL:0000576,1.50e-07,59;CL:0000040,1.50e-07,59;CL:0000559,1.50e-07,59;CL:0000767,2.47e-07,3;CL:0002009,2.64e-07,61;CL:0000839,9.26e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.14e-08;10!UBERON:0005564;3.14e-08;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.14e-08;10!UBERON:0005564;3.14e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.52e-31!80;UBERON:0001474!7.90e-29!86;UBERON:0002390!6.00e-27!102;UBERON:0003061!6.00e-27!102;UBERON:0002193!7.74e-24!112;UBERON:0004765!1.90e-23!101;UBERON:0001434!1.90e-23!101;UBERON:0002405!1.08e-19!115;UBERON:0002204!2.67e-11!167;UBERON:0002384!3.15e-09!375;UBERON:0003081!1.13e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.52e-31!80;UBERON:0001474!7.90e-29!86;UBERON:0002390!6.00e-27!102;UBERON:0003061!6.00e-27!102;UBERON:0002193!7.74e-24!112;UBERON:0004765!1.90e-23!101;UBERON:0001434!1.90e-23!101;UBERON:0002405!1.08e-19!115;UBERON:0002204!2.67e-11!167;UBERON:0002384!3.15e-09!375;UBERON:0003081!1.13e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.62e-10;8!UBERON:0003135;1.46e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.62e-10;8!UBERON:0003135;1.46e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.03e-10,8;UBERON:0003135,1.33e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,1.83650335422542,0.962787081228281,1.27867425159808,0.329851300186716,0,0,0.580418477257168,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,0.868755378820466,0,1.10483290796269,2.53169909952708,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18270532516606,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr5:142388947..142388964,+ | |short_description=p@chr5:142388947..142388964,+ | ||
}} | }} |
Latest revision as of 10:54, 30 July 2015
Short description: | p@chr5:142388947..142388964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:142388947..142388964, + |
Coexpression cluster: | C1831_testis_Eosinophils_CD14_Neutrophils_Basophils_Whole_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.94e-37 | 2 |
granulocyte | 5.16e-21 | 8 |
blood cell | 1.76e-15 | 11 |
myeloid leukocyte | 2.55e-15 | 72 |
classical monocyte | 9.10e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.10e-11 | 42 |
myeloid cell | 4.19e-10 | 108 |
common myeloid progenitor | 4.19e-10 | 108 |
defensive cell | 1.98e-09 | 48 |
phagocyte | 1.98e-09 | 48 |
leukocyte | 6.30e-08 | 136 |
monopoietic cell | 1.50e-07 | 59 |
monocyte | 1.50e-07 | 59 |
monoblast | 1.50e-07 | 59 |
promonocyte | 1.50e-07 | 59 |
basophil | 2.47e-07 | 3 |
macrophage dendritic cell progenitor | 2.64e-07 | 61 |
myeloid lineage restricted progenitor cell | 9.26e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
testis | 4.03e-10 | 8 |
male reproductive organ | 1.33e-07 | 11 |