FFCP PHASE1:Hg19::chr5:178260112..178260119,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr5:178260112..178260119,+ to FFCP PHASE1:Hg19::chr5:178260112..178260119,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:178260112..178260119,+ | |||
|coexpression_cluster_id=C3774 | |||
|description=CAGE_peak_at_chr5:178260112..178260119,+ | |||
|id=chr5:178260112..178260119,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.32e-10!5;CL:0002097!9.82e-08!2;CL:0002563!1.88e-07!4;CL:0002253!3.86e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.68e-12;6!CL:0000404;5.68e-12;6!CL:0002097;1.27e-09;2!CL:0000322;6.14e-07;3!CL:0000174;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.08e-12,6;CL:0000031,5.08e-12,6;CL:0000404,5.08e-12,6;CL:0002097,1.33e-09,2;CL:0000047,3.01e-09,8;CL:0000322,6.14e-07,3;CL:0000174,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;5.68e-12;6!UBERON:0009117;1.47e-07;10!UBERON:0005564;1.47e-07;10 | |||
|ontology_enrichment_disease=DOID:162!2.04e-14!235;DOID:14566!6.58e-14!239;DOID:0050687!4.81e-13!143;DOID:0050686!1.71e-10!137;DOID:305!2.41e-09!106;DOID:3905!4.01e-09!9;DOID:299!4.32e-09!25;DOID:5409!7.91e-08!4;DOID:1325!8.38e-08!7;DOID:3904!8.38e-08!7 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.78e-18;1!DOID:3910;8.69e-10;2!DOID:3350;1.27e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.23e-18,1;DOID:3910,8.69e-10,2;DOID:3350,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.88e-07!4;UBERON:0001262!1.88e-07!4;UBERON:0004786!1.88e-07!4;UBERON:0004808!1.88e-07!4;UBERON:0001277!1.88e-07!4;UBERON:0000013!7.20e-07!5;UBERON:0002410!7.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;8.69e-10;2!UBERON:0002173;8.69e-10;2!UBERON:0002186;8.69e-10;2!UBERON:0000473;3.14e-09;8!UBERON:0003135;5.98e-07;11!UBERON:0004821;6.14e-07;3!UBERON:0007499;6.14e-07;3!UBERON:0003215;6.14e-07;3!UBERON:0010368;6.14e-07;3!UBERON:0009911;6.14e-07;3!UBERON:0002299;6.14e-07;3!UBERON:0006524;6.14e-07;3!UBERON:0008874;6.14e-07;3!UBERON:0002169;6.14e-07;3!UBERON:0004894;6.14e-07;3!UBERON:0002369;7.92e-07;3!UBERON:0001235;7.92e-07;3!UBERON:0006858;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0000473,3.14e-09,8;UBERON:0003135,5.98e-07,11;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3;UBERON:0002369,8.15e-07,3;UBERON:0001235,8.15e-07,3;UBERON:0006858,8.15e-07,3 | |||
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| ||
|short_description=p@chr5:178260112..178260119,+ | |||
}} | }} |
Latest revision as of 13:44, 30 July 2015
Short description: | p@chr5:178260112..178260119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:178260112..178260119, + |
Coexpression cluster: | C3774_mesothelioma_bronchioalveolar_adult_embryonic_testis_large_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.08e-12 | 6 |
neuroblast | 5.08e-12 | 6 |
electrically signaling cell | 5.08e-12 | 6 |
cortical cell of adrenal gland | 1.33e-09 | 2 |
neuronal stem cell | 3.01e-09 | 8 |
pneumocyte | 6.14e-07 | 3 |
steroid hormone secreting cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
testis | 3.14e-09 | 8 |
male reproductive organ | 5.98e-07 | 11 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
adrenal gland | 8.15e-07 | 3 |
adrenal cortex | 8.15e-07 | 3 |
adrenal/interrenal gland | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.23e-18 | 1 |
lung adenocarcinoma | 8.69e-10 | 2 |
mesenchymal cell neoplasm | 1.22e-09 | 2 |