FFCP PHASE1:Hg19::chr5:33794876..33794902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:33794876..33794902,- | |||
|coexpression_cluster_id=C4494 | |||
|description=CAGE_peak_at_chr5:33794876..33794902,- | |||
|id=chr5:33794876..33794902,- | |||
|ontology_enrichment_celltype=CL:0000057!1.80e-26!75;CL:0002620!1.33e-24!23;CL:0000055!2.15e-17!180;CL:0002551!2.30e-12!6;CL:0002570!4.28e-11!8;CL:0000188!1.21e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002551;4.72e-26;6!CL:0002583;4.60e-13;2!CL:0002620;2.23e-12;23!CL:0000057;3.73e-12;73!CL:0002556;9.39e-10;6!CL:0002573;1.10e-09;2!CL:0002582;8.23e-09;3!CL:0002334;3.89e-08;12!CL:0002570;1.19e-07;8!CL:0002574;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,3.85e-26,6;CL:0000057,1.41e-19,76;CL:0002583,4.07e-13,2;CL:0002620,1.93e-12,23;CL:0002556,1.08e-09,6;CL:0002573,1.10e-09,2;CL:0002582,7.30e-09,3;CL:0002334,3.54e-08,12;CL:0000219,9.85e-08,386;CL:0002570,1.21e-07,8;CL:0002574,2.07e-07,1;CL:0000134,3.23e-07,354;CL:0002320,5.65e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.21e-07;1!DOID:3165;1.21e-07;1!DOID:0060121;1.21e-07;1!DOID:2438;1.21e-07;1!DOID:4418;1.21e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.18e-07,1;DOID:3165,1.18e-07,1;DOID:0060121,1.18e-07,1;DOID:2438,1.18e-07,1;DOID:4418,1.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.37e-23!45;UBERON:0002416!2.37e-23!45;UBERON:0002097!1.30e-20!40;UBERON:0003102!2.28e-13!95;UBERON:0002067!1.42e-10!9;UBERON:0004016!1.42e-10!9;UBERON:0010083!1.42e-10!9;UBERON:0000475!1.48e-09!365;UBERON:0001013!1.38e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.28e-24;9!UBERON:0003102;2.67e-14;50!UBERON:0002072;2.30e-11;5!UBERON:0002199;2.86e-11;46!UBERON:0002416;2.86e-11;46!UBERON:0002097;1.53e-10;41!UBERON:0001758;9.39e-10;6!UBERON:0003672;9.39e-10;6!UBERON:0003129;2.00e-08;7!UBERON:0001013;2.91e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,2.03e-24,9;UBERON:0004016,2.03e-24,9;UBERON:0010083,2.03e-24,9;UBERON:0002199,5.30e-20,46;UBERON:0002416,5.30e-20,46;UBERON:0003102,2.78e-18,99;UBERON:0002097,2.44e-13,41;UBERON:0002072,1.73e-11,5;UBERON:0001758,1.08e-09,6;UBERON:0003672,1.08e-09,6;UBERON:0003129,2.24e-08,7;UBERON:0002384,1.96e-07,371;UBERON:0001013,2.66e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,1.89515962028049,0,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0.163461903113459,0,0.576175924479999,0.70296429550139,0.936480230490962,1.71141546463335,2.69007624993242,7.39837341455719,7.76990132967031,10.3933596959664,1.02077085627447,1.47401180774122,0.309977343527296,0,0,0,0,3.19838616512726,1.12606667884768,2.49357703935765,0,0,0,0,0.538168907066586,0,0.211931901159562,1.50045548042201,0.824420233907511,0.515281080091258,0.37223371266318,0.675105328965065,0.292311015483596,0.252433774244115,0.184099797284599,0,2.84007674013291,0.906768884048762,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,4.15973914111831,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.5867062865676,0.129271715757778,0,7.607724773004,0,0,0,0,0,0,0,0,4.88604276440603,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,1.99832313276591,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,2.31314540703983,1.77561725313127,1.8067974323038,0.519254429183621,1.27831416305955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,2.87132768998086,0.650060246036521,0,0.290012154876366,0.616194468458578,0.460511024178389,1.10269257987624,0.322260734604821,0.145016693914229,0.596586391912706,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37814839895082,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,5.59136410044446,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,2.38807684618998,0.934853239388898,0.554805861502613,0.568209015825267,0,0,0,0,0.310874401165561,0,1.27437413730962,0.449803112163605,0.155262956876259,0,0.53168342911599,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,11.714868072326,12.2707302853187,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:33794876..33794902,- | |||
}} |
Latest revision as of 14:25, 30 July 2015
Short description: | p@chr5:33794876..33794902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:33794876..33794902, - |
Coexpression cluster: | C4494_schwannoma_Fibroblast_Mesenchymal_giant_Keratocytes_Sebocyte_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 3.85e-26 | 6 |
fibroblast | 1.41e-19 | 76 |
subcutaneous preadipocyte | 4.07e-13 | 2 |
skin fibroblast | 1.93e-12 | 23 |
fibroblast of periodontium | 1.08e-09 | 6 |
Schwann cell | 1.10e-09 | 2 |
visceral preadipocyte | 7.30e-09 | 3 |
preadipocyte | 3.54e-08 | 12 |
motile cell | 9.85e-08 | 386 |
mesenchymal stem cell of adipose | 1.21e-07 | 8 |
stromal cell of pancreas | 2.07e-07 | 1 |
mesenchymal cell | 3.23e-07 | 354 |
connective tissue cell | 5.65e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dermis | 2.03e-24 | 9 |
dermatome | 2.03e-24 | 9 |
future dermis | 2.03e-24 | 9 |
integument | 5.30e-20 | 46 |
integumental system | 5.30e-20 | 46 |
surface structure | 2.78e-18 | 99 |
skin of body | 2.44e-13 | 41 |
hypodermis | 1.73e-11 | 5 |
periodontium | 1.08e-09 | 6 |
dentition | 1.08e-09 | 6 |
skull | 2.24e-08 | 7 |
connective tissue | 1.96e-07 | 371 |
adipose tissue | 2.66e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.18e-07 | 1 |
skin benign neoplasm | 1.18e-07 | 1 |
integumentary system benign neoplasm | 1.18e-07 | 1 |
dermis tumor | 1.18e-07 | 1 |
cutaneous fibrous histiocytoma | 1.18e-07 | 1 |