FFCP PHASE1:Hg19::chr5:68339691..68339711,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-43bp_to_ENST00000479830_5end | |||
|cluster_id=chr5:68339691..68339711,- | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_1_at_ENST00000479830_5end | |||
|id=chr5:68339691..68339711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.36e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.03e-19;2!UBERON:0005754;7.40e-11;1!UBERON:0001041;1.70e-10;30!UBERON:0007123;2.45e-08;5!UBERON:0008947;1.35e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.13e-08!106;DOID:0050687!3.69e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.07e-30!115;UBERON:0001049!1.75e-15!57;UBERON:0005068!1.75e-15!57;UBERON:0006241!1.75e-15!57;UBERON:0007135!1.75e-15!57;UBERON:0001017!8.34e-14!82;UBERON:0005743!1.12e-13!86;UBERON:0000073!2.12e-12!94;UBERON:0001016!2.12e-12!94;UBERON:0002616!5.74e-11!59;UBERON:0000955!5.97e-11!69;UBERON:0006238!5.97e-11!69;UBERON:0003080!8.55e-11!42;UBERON:0002346!3.56e-10!90;UBERON:0003075!3.80e-10!86;UBERON:0007284!3.80e-10!86;UBERON:0002780!8.17e-10!41;UBERON:0001890!8.17e-10!41;UBERON:0006240!8.17e-10!41;UBERON:0002298!1.48e-09!8;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0001893!1.45e-08!34;UBERON:0005911!4.00e-08!82;UBERON:0002791!8.94e-08!33;UBERON:0004111!1.51e-07!241;UBERON:0001007!1.83e-07!155;UBERON:0001555!1.83e-07!155;UBERON:0007026!1.83e-07!155;UBERON:0006947!2.66e-07!3;UBERON:0004054!2.66e-07!3;UBERON:0004119!3.60e-07!169;UBERON:0000925!3.60e-07!169;UBERON:0006595!3.60e-07!169;UBERON:0000153!4.94e-07!129;UBERON:0007811!4.94e-07!129;UBERON:0001869!5.25e-07!32;UBERON:0000200!5.70e-07!6;UBERON:0000477!6.07e-07!286;UBERON:0000025!6.97e-07!194;UBERON:0000062!7.30e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.56e-28;3!UBERON:0004054;1.56e-28;3!UBERON:0005904;1.43e-21;4!UBERON:0000058;5.69e-15;10!UBERON:0000998;7.40e-11;1!UBERON:0006868;7.40e-11;1!UBERON:0001000;1.30e-10;1!UBERON:0001301;1.30e-10;1!UBERON:0005352;1.30e-10;1!UBERON:0002046;2.45e-08;5!UBERON:0003135;3.45e-08;11!UBERON:0002107;4.36e-08;19!UBERON:0006925;4.36e-08;19!UBERON:0002368;4.49e-08;33!UBERON:0003101;6.82e-07;22!UBERON:0000079;6.82e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.42e-28,3;UBERON:0004054,1.42e-28,3;UBERON:0005904,1.33e-21,4;UBERON:0005911,9.06e-12,82;UBERON:0005177,4.28e-11,101;UBERON:0000998,7.40e-11,1;UBERON:0006868,7.40e-11,1;UBERON:0001301,1.19e-10,1;UBERON:0001000,1.30e-10,1;UBERON:0005352,1.30e-10,1;UBERON:0000949,2.38e-09,45;UBERON:0007499,3.82e-09,25;UBERON:0002368,3.93e-09,35;UBERON:0002530,4.92e-09,59;UBERON:0009856,8.71e-09,26;UBERON:0004119,1.02e-08,160;UBERON:0000925,1.02e-08,160;UBERON:0006595,1.02e-08,160;UBERON:0001007,2.26e-08,145;UBERON:0001555,2.26e-08,145;UBERON:0007026,2.26e-08,145;UBERON:0002046,2.28e-08,5;UBERON:0004117,2.28e-08,5;UBERON:0007689,2.28e-08,5;UBERON:0007123,2.28e-08,5;UBERON:0003091,2.28e-08,5;UBERON:0003135,3.36e-08,11;UBERON:0009569,3.65e-08,112;UBERON:0002107,4.70e-08,19;UBERON:0006925,4.70e-08,19;UBERON:0008836,4.70e-08,19;UBERON:0000058,5.25e-08,19;UBERON:0003929,1.21e-07,54;UBERON:0004921,1.75e-07,118;UBERON:0001041,3.08e-07,87;UBERON:0008835,5.69e-07,22;UBERON:0003894,5.69e-07,22;UBERON:0003101,6.77e-07,22;UBERON:0000079,6.77e-07,22;UBERON:0002048,8.69e-07,22;UBERON:0000117,8.69e-07,22;UBERON:0000171,8.69e-07,22;UBERON:0000170,8.69e-07,22;UBERON:0005597,8.69e-07,22;UBERON:0000118,8.69e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,2.36315962672562,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0.422008249231538,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0.179021174675609,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.796554137998498,1.77977555204936,0.236387681767936,0,0,0,0,0.844175070377856,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,1.76098157038881,0,2.36750641709634,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0,2.44617335538842,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0.586654148204409,0,0.426905989478705,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,14.1735573381238,0,0,1.0896272488926,0,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,2.19828350517124,0,0.129282956361551,0.26446520348538,0,2.81926008926669,0.854299300541557,1.57204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0.122026264901963,1.001527445652,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0.327609848846413,0.983091635014877,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0.601682626794058,0,0,0,0.163771917510097,0,0.135075169236789,0,0.620060389503552,0.126831620387814,0,0,0.496211178389294,0,0.255524855279191,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,1.49136876415977,0,0.560544326627578,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,4.23387050190929,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0.198950775161368,0,1.58124514854544,0,0,0.0771741581079447,0,0,0.245148321753905,0.471353094203252,0.196308467114945,0.891139200981258,0.4226557275834,0,0.0939839179798536,0,0,0.178553938605658,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0.36757959813938,0,0.303114792872958,0,0,0.310298987585686,0.639701945702943,0.714193294391221,0,0,0,2.99141643907375,2.22328907854041,0,0,0,1.14755528628282,0,0.244209805832924,0,0,0.179650404213174,0,0.855690109280065,0.813792356631477,0,0,0 | |||
|short_description=p1@ENST00000479830 | |||
}} |
Latest revision as of 15:56, 30 July 2015
Short description: | p1@ENST00000479830 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000479830_5end |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | -43bp_to_ENST00000479830_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.36e-07 | 12 |